HHsearch alignment for GI: 254780240 and conserved domain: TIGR02782
>TIGR02782 TrbB_P P-type conjugative transfer ATPase TrbB; InterPro: IPR014149 This entry represents TrbB, a protein, which is encoded in the trb locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for plasmid conjugative transfer . TrbB is a homologue of the vir system VirB11 ATPase , and the Flp pilus system ATPase TadA ..
Probab=95.92 E-value=0.0045 Score=39.97 Aligned_cols=23 Identities=39% Similarity=0.494 Sum_probs=18.8
Q ss_pred CEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 96999878899967899999997
Q gi|254780240|r 1 MRIIFLGPPGSGKGTQACRLSQK 23 (201)
Q Consensus 1 m~I~i~G~PGsGK~T~a~~la~~ 23 (201)
T Consensus 140 ~NIlv~GGTGSGKTTLaNAlla~ 162 (315)
T TIGR02782 140 KNILVVGGTGSGKTTLANALLAE 162 (315)
T ss_pred CCEEEECCCCCCHHHHHHHHHHH
T ss_conf 98899814588579999999998