HHsearch alignment for GI: 254780240 and conserved domain: cd00227

>cd00227 CPT Chloramphenicol (Cm) phosphotransferase (CPT). Cm-inactivating enzyme; modifies the primary (C-3) hydroxyl of the antibiotic. Related structurally to shikimate kinase II.
Probab=97.84  E-value=0.00014  Score=49.50  Aligned_cols=161  Identities=16%  Similarity=0.101  Sum_probs=82.9

Q ss_pred             EEEEE-CCCCCCHHHHHHHHHHHHCCC--EECHHHHHHHHHHHH---HHHHHHHHHHHHCCCCCCCHH---HHHHHHHHH
Q ss_conf             69998-788999678999999971894--895789999999600---145666677641344554103---566555420
Q gi|254780240|r    2 RIIFL-GPPGSGKGTQACRLSQKLNVP--QLSTGDMLRAEVDRN---TLLGKQVKGSMESGSLISDAI---VNQVVCDRI   72 (201)
Q Consensus         2 ~I~i~-G~PGsGK~T~a~~la~~~~~~--~is~gdllR~~~~~~---s~~g~~i~~~l~~G~lvpd~i---i~~li~~~l   72 (201)
T Consensus         3 ~II~LNG~SSSGKSsiAraLQ~~l~~p~~h~~v-D~f~~~~p~~~~~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~i   78 (175)
T cd00227           3 RIIILNGGSSAGKSSIARALQSVLAEPWLHFGV-DSFIEALPLKCQDAEGGIEFD---GDGGVSPGPEFRLLEGAWYEAV   78 (175)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEH-HHHHHHCCCCCCCCCCCCCCC---CCCCCCCCHHHHHHHHHHHHHH
T ss_conf             499986899898899999999847675688418-589886763136875422348---7766354156999999999999


Q ss_pred             CC-CCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             23-22253178638011124578887666531252221035554221256642331123233345565678989999999
Q gi|254780240|r   73 RL-PDCDSGFILDGYPRTVDQAKSLHAFISNMDCAIDAVIELRVEDASMFKRIQVRVLEAIASEKSVRSDDKYDVFLKRI  151 (201)
Q Consensus        73 ~~-~~~~~g~ilDGFPRt~~Qa~~l~~~l~~~~~~~~~vi~L~~~~~~~~~R~~~R~~~~~~~~~~~R~DD~~e~i~~Rl  151 (201)
T Consensus        79 aa~a~aG~nvIvD~v~~~~~~l~d~~~~L~g--~-~v~~VGV~C~l~~l~~RE~~RgDR~~G------------~A~~--  141 (175)
T cd00227          79 AAMARAGANVIADDVFLGRAALQDCWRSFVG--L-DVLWVGVRCPGEVAEGRETARGDRVPG------------QARK--  141 (175)
T ss_pred             HHHHHCCCCEEEEEEECCCHHHHHHHHHHCC--C-CEEEEEEECCHHHHHHHHHHCCCCCCC------------HHHH--
T ss_conf             9999779988986312380889999998579--9-279999878999999998745899964------------6788--


Q ss_pred             HHHHHHHHHHHHHHHHCCCEEEECCCC-CHHHHHHHHHHHH
Q ss_conf             999997569999999679799993899-8899999999999
Q gi|254780240|r  152 ENYRKTILPLSSYYRDMGCLYIIDGML-DMDEVSRSIDSLL  191 (201)
Q Consensus       152 ~~y~~~~~pv~~~y~~~~~l~~Idg~~-~~~eV~~~I~~~l  191 (201)
T Consensus       142 -q~~~----VH---~~~~YDleVDTs~~sp~eCA~~I~~~l  174 (175)
T cd00227         142 -QARV----VH---AGVEYDLEVDTTHKTPIECARAIAARV  174 (175)
T ss_pred             -HHHH----HH---CCCCCCEEEECCCCCHHHHHHHHHHHH
T ss_conf             -9998----43---599885687799999999999999971