HHsearch alignment for GI: 254780240 and conserved domain: pfam00485
>pfam00485 PRK Phosphoribulokinase / Uridine kinase family. In Arabidopsis the region carries two binding domains, a phosphoribosylpyrophosphate-binding domain and, at the very C-terminus, a uracil-binding domain.
Probab=97.47 E-value=0.00014 Score=49.53 Aligned_cols=115 Identities=16% Similarity=0.119 Sum_probs=56.0
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCC-----------EECHHHHH-------HHHHHH-----HHH-------HHHHHHHH
Q ss_conf 9998788999678999999971894-----------89578999-------999960-----014-------56666776
Q gi|254780240|r 3 IIFLGPPGSGKGTQACRLSQKLNVP-----------QLSTGDML-------RAEVDR-----NTL-------LGKQVKGS 52 (201)
Q Consensus 3 I~i~G~PGsGK~T~a~~la~~~~~~-----------~is~gdll-------R~~~~~-----~s~-------~g~~i~~~ 52 (201)
T Consensus 2 IgIaG~SgSGKTT~a~~L~~~l~~~~~~~~~~~~d~~~~~d~~~~~~~~~~~~~~~~~~~~~d~P~a~d~~ll~~~l~-~ 80 (196)
T pfam00485 2 IGVAGSSGAGKTTVARTFVSIFGREGVPAAGIEGDSFHRYDRFYMDLHMEDRKRAGNNHYSFFSPEANDFDLLYEQFK-E 80 (196)
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH-H
T ss_conf 899899857199999999999660587764124317986041024437576765145788978966235999999999-9
Q ss_pred HHCCCCCC----CHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHH-HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 41344554----103566555420232225317863801112457888-7666531252221035554221256642331
Q gi|254780240|r 53 MESGSLIS----DAIVNQVVCDRIRLPDCDSGFILDGYPRTVDQAKSL-HAFISNMDCAIDAVIELRVEDASMFKRIQVR 127 (201)
Q Consensus 53 l~~G~lvp----d~ii~~li~~~l~~~~~~~g~ilDGFPRt~~Qa~~l-~~~l~~~~~~~~~vi~L~~~~~~~~~R~~~R 127 (201)
T Consensus 81 Lk~g~~i~~P~Ydf~~~~r~~~~-~~i~p~~viIvEGi~-------~l~~~~ir---~l~D~kIfid~~~d~rl~RRi~R 149 (196)
T pfam00485 81 LKEGGSGDKPIYNHVTGEADPWP-ELIEGADILFIEGLH-------GLYDERVA---QLLDLKIYVDPDIDLELIQKIQR 149 (196)
T ss_pred HHCCCCEEEEEEECCCCCCCCCC-EECCCCCEEEEECHH-------HCCCHHHH---HHHCEEEEEECCCCHHHHHHHHH
T ss_conf 70899457656751345336773-661788569994333-------30327788---76384799726801999999873
Q ss_pred CC
Q ss_conf 12
Q gi|254780240|r 128 VL 129 (201)
Q Consensus 128 ~~ 129 (201)
T Consensus 150 D~ 151 (196)
T pfam00485 150 DM 151 (196)
T ss_pred CH
T ss_conf 45