HHsearch alignment for GI: 254780240 and conserved domain: pfam01443

>pfam01443 Viral_helicase1 Viral (Superfamily 1) RNA helicase. Helicase activity for this family has been demonstrated and NTPase activity. This helicase has multiple roles at different stages of viral RNA replication, as dissected by mutational analysis.

Probab=94.44  E-value=0.037  Score=34.23  Aligned_cols=32  Identities=28%  Similarity=0.363  Sum_probs=24.1

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHCCCEECHHHH
Q ss_conf             99987889996789999999718948957899
Q gi|254780240|r    3 IIFLGPPGSGKGTQACRLSQKLNVPQLSTGDM   34 (201)
Q Consensus         3 I~i~G~PGsGK~T~a~~la~~~~~~~is~gdl   34 (201)
T Consensus         1 ~vV~gvpGsGKSt~I~~l~~~~~~~~~p~~~~   32 (226)
T pfam01443         1 IVVHGVPGCGKSTLIRKLLRTDLTVIRPTAEL   32 (226)
T ss_pred             CEEEECCCCCHHHHHHHHHHHCCCCCCCCHHH
T ss_conf             95940799988999999986478642322777