HHsearch alignment for GI: 254780240 and conserved domain: pfam03976
>pfam03976 PPK2 Polyphosphate kinase 2 (PPK2). Inorganic polyphosphate (polyP) plays a role in metabolism and regulation and has been proposed to serve as a energy source in a pre-ATP world. In prokaryotes, the synthesis and utilisation of polyP are catalysed by PPK1, PPK2 and polyphosphatases. Proteins with a single PPK2 domain catalyse polyP-dependent phosphorylation of ADP to ATP, whereas proteins containing 2 fused PPK2 domains phosphorylate AMP to ADP. The structure of PPK2 from Pseudomonas aeruginosa has revealed a a 3-layer alpha/beta/alpha sandwich fold with an alpha-helical lid similar to the structures of microbial thymidylate kinases.
Probab=97.36 E-value=0.0035 Score=40.69 Aligned_cols=182 Identities=14% Similarity=0.131 Sum_probs=104.3
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCEECH---HHHHHHHHHHHHHHHHHHHHHHHCCCCC--CCHHHHHHHHHHHCCCCC
Q ss_conf 99987889996789999999718948957---8999999960014566667764134455--410356655542023222
Q gi|254780240|r 3 IIFLGPPGSGKGTQACRLSQKLNVPQLST---GDMLRAEVDRNTLLGKQVKGSMESGSLI--SDAIVNQVVCDRIRLPDC 77 (201)
Q Consensus 3 I~i~G~PGsGK~T~a~~la~~~~~~~is~---gdllR~~~~~~s~~g~~i~~~l~~G~lv--pd~ii~~li~~~l~~~~~ 77 (201)
T Consensus 34 Iv~eG~daaGKg~~I~~l~~~lDPrg~~v~~~~~pt~eE~-~~p~lwRfw~~lP~~G~I~iFdrSWY~~~l~~rv~g~~~ 112 (229)
T pfam03976 34 VIFEGRDAAGKGGAIKRITEALNPRGARIVALPAPTEEER-SQWYFQRYVQHLPAGGEIVLFDRSWYNRAGVERVMGFCT 112 (229)
T ss_pred EEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHH-CCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCC
T ss_conf 9996657787369999998625988569986899997884-786199998637777818997462556689999834499
Q ss_pred CCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 53178638011124578887666531252221035554221256642331123233345565678989999999999997
Q gi|254780240|r 78 DSGFILDGYPRTVDQAKSLHAFISNMDCAIDAVIELRVEDASMFKRIQVRVLEAIASEKSVRSDDKYDVFLKRIENYRKT 157 (201)
Q Consensus 78 ~~g~ilDGFPRt~~Qa~~l~~~l~~~~~~~~~vi~L~~~~~~~~~R~~~R~~~~~~~~~~~R~DD~~e~i~~Rl~~y~~~ 157 (201)
T Consensus 113 ~-----~~~~~~~~~I~~FE~~L~~~G~~i-vKf~lhIsk~eQ~~Rl~~r~~~p~k~W---k~s~~D~~~~~~~d~y~~a 183 (229)
T pfam03976 113 P-----KQYERFLREIPEFERMLTDSGIRV-VKFWLSISDEEQLERFKERRNDPLKQW---KLSPMDLKSREKWDDYTKA 183 (229)
T ss_pred H-----HHHHHHHHHHHHHHHHHHHCCCEE-EEEEEECCHHHHHHHHHHHHCCCCCCC---CCCHHHHHHHHHHHHHHHH
T ss_conf 9-----999999999999999999679459-999885498999999998742974263---0677899998769999999
Q ss_pred HHHHHHHHHH-CCCEEEECCCCCHHH---HHHHHHHHHHHH
Q ss_conf 5699999996-797999938998899---999999999999
Q gi|254780240|r 158 ILPLSSYYRD-MGCLYIIDGMLDMDE---VSRSIDSLLVSV 194 (201)
Q Consensus 158 ~~pv~~~y~~-~~~l~~Idg~~~~~e---V~~~I~~~l~~~ 194 (201)
T Consensus 184 ~e~~l~~T~t~~APW~vI~a~dk~~a~l~v~~~ll~~le~~ 224 (229)
T pfam03976 184 KDEMLARTSTPDAPWTVVPADDKKRARLNVIRHLLDALKYE 224 (229)
T ss_pred HHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCC
T ss_conf 99999724999999599858980889999999999847623