HHsearch alignment for GI: 254780240 and conserved domain: pfam05729
>pfam05729 NACHT NACHT domain. This NTPase domain is found in apoptosis proteins as well as those involved in MHC transcription activation. This family is closely related to pfam00931.
Probab=96.83 E-value=0.0012 Score=43.69 Aligned_cols=22 Identities=36% Similarity=0.495 Sum_probs=19.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHH
Q ss_conf 6999878899967899999997
Q gi|254780240|r 2 RIIFLGPPGSGKGTQACRLSQK 23 (201)
Q Consensus 2 ~I~i~G~PGsGK~T~a~~la~~ 23 (201)
T Consensus 2 ~i~i~G~aG~GKTtll~kl~~~ 23 (165)
T pfam05729 2 TVILQGEAGSGKTTLLQKLALL 23 (165)
T ss_pred EEEEECCCCCCHHHHHHHHHHH
T ss_conf 8999827989899999999999