HHsearch alignment for GI: 254780240 and conserved domain: pfam05729

>pfam05729 NACHT NACHT domain. This NTPase domain is found in apoptosis proteins as well as those involved in MHC transcription activation. This family is closely related to pfam00931.
Probab=96.83  E-value=0.0012  Score=43.69  Aligned_cols=22  Identities=36%  Similarity=0.495  Sum_probs=19.8

Q ss_pred             EEEEECCCCCCHHHHHHHHHHH
Q ss_conf             6999878899967899999997
Q gi|254780240|r    2 RIIFLGPPGSGKGTQACRLSQK   23 (201)
Q Consensus         2 ~I~i~G~PGsGK~T~a~~la~~   23 (201)
T Consensus         2 ~i~i~G~aG~GKTtll~kl~~~   23 (165)
T pfam05729         2 TVILQGEAGSGKTTLLQKLALL   23 (165)
T ss_pred             EEEEECCCCCCHHHHHHHHHHH
T ss_conf             8999827989899999999999