HHsearch alignment for GI: 254780241 and conserved domain: CHL00161
>CHL00161 secY preprotein translocase subunit SecY; Validated.
Probab=100.00 E-value=0 Score=903.44 Aligned_cols=413 Identities=38% Similarity=0.643 Sum_probs=381.6
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHH
Q ss_conf 98835878899999999999999850679898739889999873035537889986427702220468735478999999
Q gi|254780241|r 15 ASFSRAKDLKSRIVFTIIALIVYRFGTYIPLPSIDFISYSKAFQSKSAGIFGLFNMFSGGAVERMAVFSLGIMPYISASI 94 (444)
Q Consensus 15 ~~~~~~~el~~Kil~Tl~il~iyrlg~~IPlPGid~~~~~~~~~~~~~~~~~~l~~~sGga~~~~sif~LGI~PyItASI 94 (444)
T Consensus 2 ~~~~k~~elr~kilfTl~il~iyrlG~~IpiPGid~~~~~~~~--~~~~~~~~~~~fsGGal~~~sIFaLGI~PyItASI 79 (417)
T CHL00161 2 KQMITKDNLRKRLLTTLGLLLLIRLGTFIPVPGIDHDAFYQNI--SSNPLSNFLNIFSGGGFSTIGLFALGILPYINASI 79 (417)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH--HCCCHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHH
T ss_conf 5145449999999999999999997151888983999999887--34639999999706127541799946788999999
Q ss_pred HHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 999998521547864114-6368999998869999999999999999723556762258750479999999999999999
Q gi|254780241|r 95 IVQLIAATVPSLENLKKE-GEQGRKVINQYTRYATVLLGILQAYGIAVGLKNGQGIVSDSDYFFVFSTIITLLGGTMFLV 173 (444)
Q Consensus 95 i~QLL~~~~P~l~~l~ke-ge~gr~ki~~~tr~ltl~~a~iQs~~~~~~l~~~~~~~~~~~~~~~~~~il~L~aGs~il~ 173 (444)
T Consensus 80 I~QLL~~~~P~L~~l~ke~Ge~Grkki~~~tR~lTl~la~iQs~~~~~~l~~---~~~~~~~~~~~~~vl~LtaGt~~lm 156 (417)
T CHL00161 80 IMQLLTKIIPSLEKLQKEEGELGRRKINKLTRYLTLGWALIQSIAISFWLKP---YAFNWNLLLVFEIVLALTTGAMIVM 156 (417)
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 9999998746599864303687899999999999999999999999998778---7458648999999999999999999
Q ss_pred HHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
Q ss_conf 99998740889875203621014657678874333320012321589999999999999999988653323210110121
Q gi|254780241|r 174 WLGEQITMRGIGNGVSLIIFSGIVAGLPSSLVSVLELGRVGSISTPLMLLIFSSTVAVIALVIFFERAQRRLLIQYPKRQ 253 (444)
Q Consensus 174 wl~e~It~~GIGnG~SLiI~~gIi~~lp~~l~~~~~~~~~~~~~~~~~l~~~~~~l~vi~~iV~v~~~~rrIPi~y~~~~ 253 (444)
T Consensus 157 WLge~IT~~GIGNG~SliIf~gIv~~~p~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~vV~~~~a~rrIPv~yak~~ 235 (417)
T CHL00161 157 WLSELITEKGIGNGASLLIFINIVSGLPKNIKQKISEAN-LSITLISGLLLILLFLITILGIIFLQEGVRKIPIISAKQL 235 (417)
T ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHHHHHHECCEEEEEEEHHHH
T ss_conf 999899864958881899999999987999999998505-6303899999999999999999742130242334547665
Q ss_pred CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 16642356431144420000237999999999868888875077772479998875306676316999999999999999
Q gi|254780241|r 254 VGNRMFQDDVSYLPLKLNTAGVVPSIFASSLLLLPATIMGFIDVSSSPTWIVGLVDSLGHGRSFYMVLYSVFIVFFAFFY 333 (444)
Q Consensus 254 ~~~~~~~~~~sylPiKin~aGvmPiIfassll~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~y~i~y~ilii~Fs~f~ 333 (444)
T Consensus 236 ~~~~~~-~~~sylPiKvN~aGVmPiIFAssll~~P~~i~~~~~~~-~~~~~~~~~~~~~~~~~~y~~~y~~LIi~Ft~Fy 313 (417)
T CHL00161 236 GKSSSL-ASNSYLPLRLNQGGVMPIIFASALLVLPLYIANLGLLK-ILLPVLYLFLPFKPNKILYWILYFVLILFFSYFY 313 (417)
T ss_pred CCCCCC-CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCC-CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 456656-86412556543445648999999999999999975885-1378999985147887299999999999999999
Q ss_pred HHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CCHHHHHHHHH
Q ss_conf 8623798999999996388447627985799999999999999999999999999999999848841--00257999999
Q gi|254780241|r 334 TAIVFNPKEAADNLKKHGGFIPGIRPGDRTALHIDYVLTRVTVVGAGYLVCVCIFPEALIAVTGVPV--SLSGTSLLIIV 411 (444)
Q Consensus 334 ~~i~~~P~~iAe~L~k~g~~IpGiRPG~~T~~yL~~v~~rit~~Ga~~l~~la~~p~~~~~~~~~~~--~~gGTslLI~V 411 (444)
T Consensus 314 t~i~~nP~eiAenl~k~G~~IpGiRPG~~T~~yL~~vl~rit~~GaifL~iia~~P~~~~~~~~~~~~~~~ggTslLI~V 393 (417)
T CHL00161 314 SSLVLNPKDISENLKKMAVSIPGIRPGKETTKYLEKVLNRLTFLGALFLAFIALLPNIVEFVLNLSIFKGLGATSLLILV 393 (417)
T ss_pred HHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 99716899999999986981789899866899999999999999899999999999999998198622654253556568
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999985265643
Q gi|254780241|r 412 SVVLDTIVQIQGYLIAQQYEGVFK 435 (444)
Q Consensus 412 gv~l~~~~qi~a~~~~~~Y~~~~~ 435 (444)
T Consensus 394 gV~ldt~~qI~s~l~~~~Y~g~l~ 417 (417)
T CHL00161 394 GVAIDTTRQIQTYVISNNYENMRD 417 (417)
T ss_pred HHHHHHHHHHHHHHHHHHCCHHCC
T ss_conf 979989999999999965003119