HHsearch alignment for GI: 254780241 and conserved domain: PRK12417
>PRK12417 secY preprotein translocase subunit SecY; Reviewed.
Probab=100.00 E-value=0 Score=826.51 Aligned_cols=395 Identities=21% Similarity=0.383 Sum_probs=353.0
Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHH
Q ss_conf 88358788999999999999998506798987398899998730355378899864277022204687354789999999
Q gi|254780241|r 16 SFSRAKDLKSRIVFTIIALIVYRFGTYIPLPSIDFISYSKAFQSKSAGIFGLFNMFSGGAVERMAVFSLGIMPYISASII 95 (444)
Q Consensus 16 ~~~~~~el~~Kil~Tl~il~iyrlg~~IPlPGid~~~~~~~~~~~~~~~~~~l~~~sGga~~~~sif~LGI~PyItASIi 95 (444)
T Consensus 2 ~~f~~~eLrkrilfTl~il~iyRlG~~IpiPgi~~~~~~~----~~~~~~~~~~~fsGGal~~~siFaLGI~PYItASII 77 (399)
T PRK12417 2 KKFEYKIIYKKILFTCFILFIYILGSNISIPFVSYNDMQG----GDESFFKLAISNMGGNLRTLNIFSLGLGPWMTSMII 77 (399)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_conf 7430089999999999999999953626899939999964----065699999998521187749999168889999999
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998521547864114636899999886999999999999999972355676225875047999999999999999999
Q gi|254780241|r 96 VQLIAATVPSLENLKKEGEQGRKVINQYTRYATVLLGILQAYGIAVGLKNGQGIVSDSDYFFVFSTIITLLGGTMFLVWL 175 (444)
Q Consensus 96 ~QLL~~~~P~l~~l~kege~gr~ki~~~tr~ltl~~a~iQs~~~~~~l~~~~~~~~~~~~~~~~~~il~L~aGs~il~wl 175 (444)
T Consensus 78 ~QLLt~-----~~~~~~~~~~~~~~~~~~rylTv~la~iQs~~~~~~~~~~~----~~~~~~~~~~~~~L~aGt~~lmWL 148 (399)
T PRK12417 78 LMLFSY-----RKRDKYMKQTSEEQHYRERILTLIIAVIQSLAVIHSYPSKE----GVSQTNILLTTLILVTGTYLLVWL 148 (399)
T ss_pred HHHHHC-----HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC----CCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999806-----22346567403332322489999999999999998720336----765027999999999999999999
Q ss_pred HHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC
Q ss_conf 99874088987520362101465767887433332001232158999999999999999998865332321011012116
Q gi|254780241|r 176 GEQITMRGIGNGVSLIIFSGIVAGLPSSLVSVLELGRVGSISTPLMLLIFSSTVAVIALVIFFERAQRRLLIQYPKRQVG 255 (444)
Q Consensus 176 ~e~It~~GIGnG~SLiI~~gIi~~lp~~l~~~~~~~~~~~~~~~~~l~~~~~~l~vi~~iV~v~~~~rrIPi~y~~~~~~ 255 (444)
T Consensus 149 gE~IT~kGIG-G~SliI~~gIi~~~p~~~~~~~~~~~------~~~~l~~~~~~v~i~~iv~~~~a~rrIPv~~~~~~~~ 221 (399)
T PRK12417 149 ADLNARYGIG-GPMPIVMVSMIKSIFNDIMEYIDASH------IVIALLILLTLIALYLLLFIERSEYRIPYNDIMNHNR 221 (399)
T ss_pred HHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHEEEEEEEEEEEEEHHHHHCC
T ss_conf 8999834667-60599999999987999999999888------9999999999999998401361688876212434325
Q ss_pred CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCC-CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 64235643114442000023799999999986888887507777-24799988753066763169999999999999998
Q gi|254780241|r 256 NRMFQDDVSYLPLKLNTAGVVPSIFASSLLLLPATIMGFIDVSS-SPTWIVGLVDSLGHGRSFYMVLYSVFIVFFAFFYT 334 (444)
Q Consensus 256 ~~~~~~~~sylPiKin~aGvmPiIfassll~~p~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~y~i~y~ilii~Fs~f~~ 334 (444)
T Consensus 222 ~~~----~sylPlKvN~aGVmPiIFAssll~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~iLIi~FtyFyt 297 (399)
T PRK12417 222 FKM----YSYLSIKVNPAGGIPIMYSMSLFVFPQYIIILILSIFPNNKGISDDMPMLSFGSPVGISVYLVLQMLLSYFFS 297 (399)
T ss_pred CCC----CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 786----2156675245553189999999999999999951347774389999997189984799999999999999999
Q ss_pred HHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCCHHHHHHHHHH
Q ss_conf 6237989999999963884476279857999999999999999999999999999999998488--41002579999999
Q gi|254780241|r 335 AIVFNPKEAADNLKKHGGFIPGIRPGDRTALHIDYVLTRVTVVGAGYLVCVCIFPEALIAVTGV--PVSLSGTSLLIIVS 412 (444)
Q Consensus 335 ~i~~~P~~iAe~L~k~g~~IpGiRPG~~T~~yL~~v~~rit~~Ga~~l~~la~~p~~~~~~~~~--~~~~gGTslLI~Vg 412 (444)
T Consensus 298 ~i~~nP~~iAenLkK~G~fIpGIRPG~~T~~YL~~vl~rit~~GaifLaiia~lP~~~~~~~~~~~~~~~ggtslLI~Vg 377 (399)
T PRK12417 298 FVLINTKQISKRMLKSGNYIEGIYPGKDTERYLNKIARRFCWFGGFFVAVIIGIPLYFTLFVPHLLTEIYFSGQFMVFVG 377 (399)
T ss_pred HHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEE
T ss_conf 95118999999999779858898998647999999999999977999999999889999962420343332347178774
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999998526564
Q gi|254780241|r 413 VVLDTIVQIQGYLIAQQYEGVF 434 (444)
Q Consensus 413 v~l~~~~qi~a~~~~~~Y~~~~ 434 (444)
T Consensus 378 Valdt~~Qies~l~~~~Y~gfl 399 (399)
T PRK12417 378 MSFNIADEIRTYLYFDKYKPLL 399 (399)
T ss_pred EEHHHHHHHHHHHHHHHCCCCC
T ss_conf 3061899999999996427559