HHsearch alignment for GI: 254780241 and conserved domain: TIGR02920
>TIGR02920 secY_rel translocase, putative; InterPro: IPR014269 Members of this entry are restricted to the Firmicutes lineage (low-GC Gram-positive bacteria) and appear to be paralogous to, and much more divergent than, the preprotein translocase SecY..
Probab=100.00 E-value=0 Score=542.21 Aligned_cols=396 Identities=26% Similarity=0.453 Sum_probs=331.6
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 89999999999999985067989873988999987303553788998642770222046873547899999999999852
Q gi|254780241|r 23 LKSRIVFTIIALIVYRFGTYIPLPSIDFISYSKAFQSKSAGIFGLFNMFSGGAVERMAVFSLGIMPYISASIIVQLIAAT 102 (444)
Q Consensus 23 l~~Kil~Tl~il~iyrlg~~IPlPGid~~~~~~~~~~~~~~~~~~l~~~sGga~~~~sif~LGI~PyItASIi~QLL~~~ 102 (444)
T Consensus 2 ~~Kk~lfT~fil~IY~lG~~I~iPfv~~s--~~~~~~~~~~f~~~~~~~~GGnl~~l~IFSlGL~P~m~sMiil~L~s~~ 79 (403)
T TIGR02920 2 IYKKILFTCFILIIYVLGSYIPIPFVEVS--KKDMKGKKNSFFKLAIANTGGNLSTLSIFSLGLGPWMSSMIILQLFSFK 79 (403)
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCCCCC--HHHCCCCCCCHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHCCC
T ss_conf 00588999999999997155555751032--4341444540888878771664015115564213688999999984431
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCHHHHHH-HHHHHHHHHHHHHHHHHHH
Q ss_conf 15478641146368999998869999999999999999723556-762258750479999-9999999999999999874
Q gi|254780241|r 103 VPSLENLKKEGEQGRKVINQYTRYATVLLGILQAYGIAVGLKNG-QGIVSDSDYFFVFST-IITLLGGTMFLVWLGEQIT 180 (444)
Q Consensus 103 ~P~l~~l~kege~gr~ki~~~tr~ltl~~a~iQs~~~~~~l~~~-~~~~~~~~~~~~~~~-il~L~aGs~il~wl~e~It 180 (444)
T Consensus 80 -----~~~g~~~~s~~~~~~~~~~LTLiI~~IQ~~~~~~~~~~~r~~~~~~----~~~L~n~liL~tGt~l~VWL~d~N~ 150 (403)
T TIGR02920 80 -----KSDGLSAQSQKEQQYRERVLTLIIAIIQSLAVIHSFTNKRNGLSDI----NMLLLNILILVTGTLLLVWLADLNA 150 (403)
T ss_pred -----CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf -----0046443478999999999999999999999999876644114589----9999999999998999998983435
Q ss_pred HCCCCCCCHHHHCCCHHH-HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCC
Q ss_conf 088987520362101465-7678874333320012321589999999999999999988653323210110121166423
Q gi|254780241|r 181 MRGIGNGVSLIIFSGIVA-GLPSSLVSVLELGRVGSISTPLMLLIFSSTVAVIALVIFFERAQRRLLIQYPKRQVGNRMF 259 (444)
Q Consensus 181 ~~GIGnG~SLiI~~gIi~-~lp~~l~~~~~~~~~~~~~~~~~l~~~~~~l~vi~~iV~v~~~~rrIPi~y~~~~~~~~~~ 259 (444)
T Consensus 151 ~YGig-G~~~ivl~S~~~G~~~nI~~~~~e~~~~~~~~~~~I~L~i~l~l~~~f~L~f~e~~~Yri~v~--~--~~~~~~ 225 (403)
T TIGR02920 151 KYGIG-GSMPIVLVSILKGAINNIPSDVFELLQTSYIWILLIALLILLLLVALFLLAFIERAEYRIPVN--D--ISLHNR 225 (403)
T ss_pred CCCCC-CCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE--C--CCCCCC
T ss_conf 57655-448898877874023412678775312341289999999999999999999886410010120--3--365321
Q ss_pred CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH-HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 564311444200002379999999998688888750777724-7999887530667631699999999999999986237
Q gi|254780241|r 260 QDDVSYLPLKLNTAGVVPSIFASSLLLLPATIMGFIDVSSSP-TWIVGLVDSLGHGRSFYMVLYSVFIVFFAFFYTAIVF 338 (444)
Q Consensus 260 ~~~~sylPiKin~aGvmPiIfassll~~p~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~y~i~y~ilii~Fs~f~~~i~~ 338 (444)
T Consensus 226 ~~~~sYl~~klNpAG~m~~M~~~s~l~~p~~~~~l~g~~F~~~s~i~~~~~~f~f~~~~Gi~iYl~~~~~Ls~~f~fv~i 305 (403)
T TIGR02920 226 LNLKSYLPIKLNPAGGMAYMVVMSLLMLPKYIIILLGRIFPNSSDINSLVKEFSFSSPVGILIYLILQMLLSYFFTFVNI 305 (403)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 13552341001511333899999999999999999998723773400022503427741779999999999999997528
Q ss_pred CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCCHHHHHHHHHHHHHH
Q ss_conf 989999999963884476279857999999999999999999999999999999998488--410025799999999999
Q gi|254780241|r 339 NPKEAADNLKKHGGFIPGIRPGDRTALHIDYVLTRVTVVGAGYLVCVCIFPEALIAVTGV--PVSLSGTSLLIIVSVVLD 416 (444)
Q Consensus 339 ~P~~iAe~L~k~g~~IpGiRPG~~T~~yL~~v~~rit~~Ga~~l~~la~~p~~~~~~~~~--~~~~gGTslLI~Vgv~l~ 416 (444)
T Consensus 306 n~~~~sk~f~ksG~Yi~gi~PG~~T~ryLn~~~~~~~~fG~~~~a~~~g~Plyf~Lf~~~L~~~~~~~~~~~m~~~~~~~ 385 (403)
T TIGR02920 306 NPKEKSKSFRKSGNYIPGIKPGKDTQRYLNRLARRICWFGGVLVAILLGIPLYFALFVPHLLTEAYIPGQFIMITGMSFN 385 (403)
T ss_pred CHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHH
T ss_conf 85899999852788178988996068898889899988889998899876234321561110002221343454223210
Q ss_pred HHHHHHHHHHHHHHHHHH
Q ss_conf 999999999998526564
Q gi|254780241|r 417 TIVQIQGYLIAQQYEGVF 434 (444)
Q Consensus 417 ~~~qi~a~~~~~~Y~~~~ 434 (444)
T Consensus 386 I~d~i~~~l~~~~Y~~~l 403 (403)
T TIGR02920 386 IADEIRAILYFDKYKPLL 403 (403)
T ss_pred HHHHHHHHHHHCCCCCCC
T ss_conf 255676442000345469