HHsearch alignment for GI: 254780241 and conserved domain: pfam00344
>pfam00344 SecY eubacterial secY protein.
Probab=100.00 E-value=0 Score=653.10 Aligned_cols=334 Identities=50% Similarity=0.817 Sum_probs=306.6
Q ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC----CCCCCCCC
Q ss_conf 46873547899999999999852154786411463689999988699999999999999997235567----62258750
Q gi|254780241|r 80 AVFSLGIMPYISASIIVQLIAATVPSLENLKKEGEQGRKVINQYTRYATVLLGILQAYGIAVGLKNGQ----GIVSDSDY 155 (444)
Q Consensus 80 sif~LGI~PyItASIi~QLL~~~~P~l~~l~kege~gr~ki~~~tr~ltl~~a~iQs~~~~~~l~~~~----~~~~~~~~ 155 (444)
T Consensus 1 Slf~LGI~P~ItAsIi~QLL~~~~p~l~~l~~~g~~gr~k~~~~tr~ltl~~a~iqa~~~~~~~~~~~~~~~~~~~~~~~ 80 (340)
T pfam00344 1 SIFALGIGPYITASIIMQLLTVVGPKLEKLDKEGEEGRKKIQQYTRYLTLVLALIQAIGIVLGLGSYGAFSNGIVLGVGF 80 (340)
T ss_pred CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
T ss_conf 94450668999999999999988677999853287669999999999999999999999999986147655554356309
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCC--CCHHHHHHHHHHHHHHHH
Q ss_conf 479999999999999999999987408898752036210146576788743333200123--215899999999999999
Q gi|254780241|r 156 FFVFSTIITLLGGTMFLVWLGEQITMRGIGNGVSLIIFSGIVAGLPSSLVSVLELGRVGS--ISTPLMLLIFSSTVAVIA 233 (444)
Q Consensus 156 ~~~~~~il~L~aGs~il~wl~e~It~~GIGnG~SLiI~~gIi~~lp~~l~~~~~~~~~~~--~~~~~~l~~~~~~l~vi~ 233 (444)
T Consensus 81 ~~~~~~vl~L~~Gs~i~~wL~e~It~~GiGnGiSLiI~~gI~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~ 160 (340)
T pfam00344 81 LNLLLIVLQLTAGTMFLMWLGELITKYGIGNGISLIIFAGIVSSIPWAIINLFSLLSSGGGLLSILYLLLLLIATLAVIL 160 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999974387776189999999999999999999987326661028999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
Q ss_conf 99988653323210110121166423564311444200002379999999998688888750777724799988753066
Q gi|254780241|r 234 LVIFFERAQRRLLIQYPKRQVGNRMFQDDVSYLPLKLNTAGVVPSIFASSLLLLPATIMGFIDVSSSPTWIVGLVDSLGH 313 (444)
Q Consensus 234 ~iV~v~~~~rrIPi~y~~~~~~~~~~~~~~sylPiKin~aGvmPiIfassll~~p~~i~~~~~~~~~~~~~~~~~~~~~~ 313 (444)
T Consensus 161 ~~v~~~~~~~~IPi~~~~~~~~~--~~~~~~~lPiKln~agvmPiIfassll~~p~~i~~~l~~~~~~~~~~~l~~~~~~ 238 (340)
T pfam00344 161 LVVYLQEARRRIPIQYAKRVVGG--GRGQSSYLPIKLNYAGVIPIIFASSLLANPQTIAQFLGSSFPLWPVSGLAYYLPI 238 (340)
T ss_pred HHHHHCCCEEEEEEEEHHHHCCC--CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
T ss_conf 99985003578765330001346--7886415446523444438999999999999999996304740079999998387
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 76316999999999999999862379899999999638844762798579999999999999999999999999999999
Q gi|254780241|r 314 GRSFYMVLYSVFIVFFAFFYTAIVFNPKEAADNLKKHGGFIPGIRPGDRTALHIDYVLTRVTVVGAGYLVCVCIFPEALI 393 (444)
Q Consensus 314 ~~~~y~i~y~ilii~Fs~f~~~i~~~P~~iAe~L~k~g~~IpGiRPG~~T~~yL~~v~~rit~~Ga~~l~~la~~p~~~~ 393 (444)
T Consensus 239 ~~~~y~~~~~~lii~Fs~f~~~~~~~p~~iAe~l~k~g~~IpGiRpG~~T~~yL~k~i~~~t~~G~~~l~~la~~p~~~~ 318 (340)
T pfam00344 239 GSPVYILFYIVLIIFFSYFYTAIGFNPKDIAENLKKSGGFIPGIRPGKSTEKYLNRVIPRLTFIGAIFLGLLAVLPDLLG 318 (340)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 74899999999999999999996578899999999869861484898579999999999999999999999999999999
Q ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 98488410025799999999999999
Q gi|254780241|r 394 AVTGVPVSLSGTSLLIIVSVVLDTIV 419 (444)
Q Consensus 394 ~~~~~~~~~gGTslLI~Vgv~l~~~~ 419 (444)
T Consensus 319 ~~~----~~gGtslLI~V~v~~~~~~ 340 (340)
T pfam00344 319 ALG----GFGGTSLLIAVGVALDTYE 340 (340)
T ss_pred HHH----CCCHHHHHHHHHHHHHHCC
T ss_conf 842----7527767888786785039