HHsearch alignment of GI: 254780241 and MMDB domain: 2akh_Y_41-400
>2akh_Y (Y:41-400) Preprotein translocase SECY subunit; protein transport, translocation, transmembrane, transport; 14.90A {Escherichia coli} PDB: 2aki_Y
Probab=100.00 E-value=0 Score=685.95 Aligned_cols=357 Identities=50% Similarity=0.901 Sum_probs=345.9
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC---CCCCCCCCHH
Q ss_conf 6873547899999999999852154786411463689999988699999999999999997235567---6225875047
Q gi|254780241|r 81 VFSLGIMPYISASIIVQLIAATVPSLENLKKEGEQGRKVINQYTRYATVLLGILQAYGIAVGLKNGQ---GIVSDSDYFF 157 (444)
Q Consensus 81 if~LGI~PyItASIi~QLL~~~~P~l~~l~kege~gr~ki~~~tr~ltl~~a~iQs~~~~~~l~~~~---~~~~~~~~~~ 157 (444)
+|+|||+|||||||+||||+..+|+++|+|||||+||||+|++|||+|+++|++||++++.++++.. +...+++..+
T Consensus 1 lf~LGI~P~ItasIi~QlL~~~~p~l~~l~~~~~~gr~k~~~~tr~ltl~~a~iqa~~~~~~~~~~~~~~~~~~~~~~~~ 80 (360)
T 2akh_Y 1 IFALGIMPYISASIIIQLLTVVHPTLAEIKKEGESGRRKISQYTRYGTLVLAIFQSIGIATGLPNMPGMQGLVINPGFAF 80 (360)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHH
T ss_conf 99974389999999999999876769998651754389999999999999999999999987623677554233783699
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999874088987520362101465767887433332001232158999999999999999998
Q gi|254780241|r 158 VFSTIITLLGGTMFLVWLGEQITMRGIGNGVSLIIFSGIVAGLPSSLVSVLELGRVGSISTPLMLLIFSSTVAVIALVIF 237 (444)
Q Consensus 158 ~~~~il~L~aGs~il~wl~e~It~~GIGnG~SLiI~~gIi~~lp~~l~~~~~~~~~~~~~~~~~l~~~~~~l~vi~~iV~ 237 (444)
.+.++++|++|+++++|+||+|||||+|||+|++|++||++++|+.+.+.++.....+.+....++.+..+++++++++|
T Consensus 81 ~~~~i~~L~~G~~i~~wL~e~i~~~GiGnG~SllI~~~I~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 160 (360)
T 2akh_Y 81 YFTAVVSLVTGTMFLMWLGEQITERGIGNGISIIIFAGIVAGLPPAIAHTIEQARQGDLHFLVLLLVAVLVFAVTFFVVF 160 (360)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEE
T ss_conf 99999999999999999888987537477815687899987889999998876126852499999999999999886046
Q ss_pred HHHHHHHHHHCCCHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCH
Q ss_conf 86533232101101211664235643114442000023799999999986888887507777247999887530667631
Q gi|254780241|r 238 FERAQRRLLIQYPKRQVGNRMFQDDVSYLPLKLNTAGVVPSIFASSLLLLPATIMGFIDVSSSPTWIVGLVDSLGHGRSF 317 (444)
Q Consensus 238 v~~~~rrIPi~y~~~~~~~~~~~~~~sylPiKin~aGvmPiIfassll~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (444)
+|+++||||+||+|++.+++.++++++|+|+|+||+||||+|||++++++|++++++++....++|..++.+++++++|+
T Consensus 161 ~~~~~~~Ipi~~~~~~~~~~~~~~~~~~iPiKln~agvmPiIfassll~~p~~i~~~l~~~~~~~~~~~i~~~~s~~~~~ 240 (360)
T 2akh_Y 161 VERGQRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIPAIFASSIILFPATIASWFGGGTGWNWLTTISLYLQPGQPL 240 (360)
T ss_pred EEECCCCCEEEEHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHH
T ss_conf 76411001122110015655456654534001278888899999999999999998732243178999999870899829
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 69999999999999998623798999999996388447627985799999999999999999999999999999999848
Q gi|254780241|r 318 YMVLYSVFIVFFAFFYTAIVFNPKEAADNLKKHGGFIPGIRPGDRTALHIDYVLTRVTVVGAGYLVCVCIFPEALIAVTG 397 (444)
Q Consensus 318 y~i~y~ilii~Fs~f~~~i~~~P~~iAe~L~k~g~~IpGiRPG~~T~~yL~~v~~rit~~Ga~~l~~la~~p~~~~~~~~ 397 (444)
|.++|++++++|+|||+..++||||+||||+|+|++|||+||||+|+|||+|+++|++++||++++++|++|++++..++
T Consensus 241 ~~~~y~vlii~f~~~~~~~~~~p~~ia~~l~k~g~~IpGvrpg~~T~~~L~~~i~~~~~~G~i~l~~la~~p~~~~~~~~ 320 (360)
T 2akh_Y 241 YVLLYASAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLVGALYITFICLIPEFMRDAMK 320 (360)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999993789999999998589688989981359999999999999999999999999999999609
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8410025799999999999999999999998526564311
Q gi|254780241|r 398 VPVSLSGTSLLIIVSVVLDTIVQIQGYLIAQQYEGVFKKS 437 (444)
Q Consensus 398 ~~~~~gGTslLI~Vgv~l~~~~qi~a~~~~~~Y~~~~~~~ 437 (444)
.+..+||||++|+|+|++|++||+++++.+++|++++||+
T Consensus 321 ~~~~~~gt~ili~V~vi~~~~~qi~~~~~~~~y~~~~~~~ 360 (360)
T 2akh_Y 321 VPFYFGGTSLLIVVVVIMDFMAQVQTLMMSSQYESALKKA 360 (360)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 8802637889999999999999999999899877873479