HHsearch results for GI: 254780241 and protein with PDBid: 3dl8_G
>3dl8_G Preprotein translocase subunit SECY; RECA-type ATPase membrane protein translocation protein- protein complex, ATP-binding, cell membrane; 7.50A {Aquifex aeolicus}
Probab=100.00 E-value=0 Score=843.13 Aligned_cols=421 Identities=40% Similarity=0.789 Sum_probs=395.9
Q ss_pred CCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHH
Q ss_conf 58898835878899999999999999850679898739889999873035537889986427702220468735478999
Q gi|254780241|r 12 LNFASFSRAKDLKSRIVFTIIALIVYRFGTYIPLPSIDFISYSKAFQSKSAGIFGLFNMFSGGAVERMAVFSLGIMPYIS 91 (444)
Q Consensus 12 ~~~~~~~~~~el~~Kil~Tl~il~iyrlg~~IPlPGid~~~~~~~~~~~~~~~~~~l~~~sGga~~~~sif~LGI~PyIt 91 (444)
+..+|+||+||||||++||++++++||+|++||+||||++++++.+++.++++++++|+|+|||++|+|+|+|||+||||
T Consensus 3 ~~l~~~~~~~~L~~rll~Tl~iL~iy~lg~~IPlpGi~~~~~~~~~~~~~~~~~~~l~~~~Gg~~~~~Slf~LGI~P~It 82 (429)
T 3dl8_G 3 EYLKALFELKELRQKFIFTLLMFVIYRLGSHIPIPGINPEALRDFLKAFEGSVFALYDIFSGGNLGRLTVFALGVMPYIS 82 (429)
T ss_dssp -----CCSCCCCHHHHHHHHHHHHHHHHHHHCSSCCCC---------------CCSSSSSSCCSSSCCCSSSSSHHHHHH
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHCCHHHHCCHHHHH
T ss_conf 78998867699999999999999999986238999859999999987435648999999714216303288717588999
Q ss_pred HHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-----CCCCCCCCCHHHHHHHHHH
Q ss_conf 99999999852154786411-46368999998869999999999999999723556-----7622587504799999999
Q gi|254780241|r 92 ASIIVQLIAATVPSLENLKK-EGEQGRKVINQYTRYATVLLGILQAYGIAVGLKNG-----QGIVSDSDYFFVFSTIITL 165 (444)
Q Consensus 92 ASIi~QLL~~~~P~l~~l~k-ege~gr~ki~~~tr~ltl~~a~iQs~~~~~~l~~~-----~~~~~~~~~~~~~~~il~L 165 (444)
|||+||||++..|.++|++| |||+||||++++||++|+++|++||++++.++... ...+.+++..+.+.++++|
T Consensus 83 AsIi~QLL~~~~~~~~~l~~~eg~~g~~ki~~~tr~lt~~~a~iqs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~L 162 (429)
T 3dl8_G 83 ASIMMQLLTVAIPSLQRLAKEEGDYGRYKINEYTKYLTLFVATVQSLGIAFWIRGQVSPKGIPVVENPGISFILITVLTL 162 (429)
T ss_dssp HHHHHHHHHHHSSCSSSCSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCCCCSSSTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHH
T ss_conf 99999999716200666322437889999999999999999999999999997403566554123175099999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999987408898752036210146576788743333200123215899999999999999999886533232
Q gi|254780241|r 166 LGGTMFLVWLGEQITMRGIGNGVSLIIFSGIVAGLPSSLVSVLELGRVGSISTPLMLLIFSSTVAVIALVIFFERAQRRL 245 (444)
Q Consensus 166 ~aGs~il~wl~e~It~~GIGnG~SLiI~~gIi~~lp~~l~~~~~~~~~~~~~~~~~l~~~~~~l~vi~~iV~v~~~~rrI 245 (444)
++|++++||+||+|||||+|||+|++|++||++++|+.+.+.+.....+.......+..+..++++++++||+|++||||
T Consensus 163 ~~Gs~~l~wl~e~it~~GIGnGiSliI~~gI~~~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~vi~~vv~~~~~~~~I 242 (429)
T 3dl8_G 163 VAGTMFLVWIADRITEKGIGNGASLIIFAGIVANFPNAVIQFYEKVKTGDIGPLTLLLIIALIIAIIVGIVYVQEAERRI 242 (429)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHTTTTSSCCCCSSSCSSSCTHHHHHHHHHHHHHHHHHTCSCCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999998874347883157550222058166642132113675315799999999999999999997664476
Q ss_pred HHCCCHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 10110121166423564311444200002379999999998688888750777724799988753066763169999999
Q gi|254780241|r 246 LIQYPKRQVGNRMFQDDVSYLPLKLNTAGVVPSIFASSLLLLPATIMGFIDVSSSPTWIVGLVDSLGHGRSFYMVLYSVF 325 (444)
Q Consensus 246 Pi~y~~~~~~~~~~~~~~sylPiKin~aGvmPiIfassll~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~y~i~y~il 325 (444)
|+||+|++++++.++++++|+|+|+||+||||+||||+++++|+++++++.+.. ..++.+.+.++.++|..+|+++
T Consensus 243 pi~~~~~~~~~~~~~g~~~yiPiKln~agvmPiIfasall~~p~~i~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~l 318 (429)
T 3dl8_G 243 PIQYPGRQVGRQLYAGRKTYLPIKINPAGVIPIIFAQALLLIPSTLLNFVQNPF----IKVIADMFQPGAIFYNFLYVTF 318 (429)
T ss_dssp CCBCSSSCBCCCCCCCCCCCCCCCCCCCCSSHHHHHHHHHHHHHHHHHSCSSCC----CCTTTTTTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHCCCCHHHHHHHHHH
T ss_conf 553255541443457874054320221304699999999989999999851578----9999999578865999999999
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
Q ss_conf 99999999862379899999999638844762798579999999999999999999999999999999984884100257
Q gi|254780241|r 326 IVFFAFFYTAIVFNPKEAADNLKKHGGFIPGIRPGDRTALHIDYVLTRVTVVGAGYLVCVCIFPEALIAVTGVPVSLSGT 405 (444)
Q Consensus 326 ii~Fs~f~~~i~~~P~~iAe~L~k~g~~IpGiRPG~~T~~yL~~v~~rit~~Ga~~l~~la~~p~~~~~~~~~~~~~gGT 405 (444)
+++|+|||+.+++||||+||||+|+|++|||+||||+|+|||+|+++|+|++||+|++++|++|++++..++.+..+|||
T Consensus 319 iiff~~~~~~~~~~p~~iA~~L~k~g~~IpGiRpG~~T~~yL~~~i~~~t~~G~i~l~~ia~~p~l~~~~~~~~~~~gGT 398 (429)
T 3dl8_G 319 IVFFTYFYTAVLINPVELAENLHKAGAFIPGVRPGQDTVKYLERIINRLIFFGALFLSVIALIPILISVWFNIPFYFGGT 398 (429)
T ss_dssp HHHHHHHHHTCTTHHHHHHHTCCCCBSSSBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCSCCCSTH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
T ss_conf 99999999996458899999999869867884998667999999999999999999999999999999970867533278
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999852656431
Q gi|254780241|r 406 SLLIIVSVVLDTIVQIQGYLIAQQYEGVFKK 436 (444)
Q Consensus 406 slLI~Vgv~l~~~~qi~a~~~~~~Y~~~~~~ 436 (444)
|+||+|||++|++||+|+|+.+++||+++||
T Consensus 399 slLI~Vgv~~~~~~qi~s~~~~~~Y~~~l~k 429 (429)
T 3dl8_G 399 TALIVVGVALDTFRQIETYLIQKKYKSYVRR 429 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCCTTCSCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 8998899999999999999999862686378