PSIBLAST alignment of GI: 254780241 and protein with PDB id: 3mp7
>gi|308198535|pdb|3MP7|A Chain A, Lateral Opening Of A Translocon Upon Entry Of Protein Suggests The Mechanism Of Insertion Into Membranes Length = 482
Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats.
Identities = 87/467 (18%), Positives = 166/467 (35%), Gaps = 82/467 (17%)
Query: 23 LKSRIVFTIIALIVYRFGTYIPLPSIDFISYSKAFQSKSAGIFGLFNMFSGGAVERMAVF 82
L+ R ++T +ALI+Y IP+ I FQ + G ++
Sbjct: 26 LRERFMWTGVALILYYVLAEIPVYGI-PERIQDYFQ--------FLRVVLAG--RNGSIL 74
Query: 83 SLGIMPYISASIIVQLIAATVPSLENLKKEGEQGRKVINQYTRYATVLLGILQAYGIAVG 142
+LGI P ++A II+QL+ + +L + R+ R +V + +A +G
Sbjct: 75 TLGIGPIVTAGIILQLLVGSEIIKLDLAN--PEDRRFYQALQRVFSVFMCFFEAAVWILG 132
Query: 143 LKNGQGIVSDSDYFFVFSTIITLLGGTMFLVWLGEQITMRGIGNGVSLIIFSGIVAG--- 199
G+ V D Y I+ L G + L+ L E ++ GIG+G+SL I +G+
Sbjct: 133 GAFGRVGV-DVTYAIAVLMILQLAMGGIVLIILDELVSKWGIGSGISLFIAAGVSQTILT 191
Query: 200 ---------------------------LPSSLVSVLELGRVGSISTPLMLLIFSSTVAVI 232
++ G + + +L +T+ V
Sbjct: 192 RSLNPLTDPNIIDPLTGQPAIVGAIPYFIQHILKGDLWGAIYRGGSAPDMLSVVATIVVF 251
Query: 233 ALVIFFERAQRRLLIQYPKRQVGNRMFQDDVSYLPLKLNTAGVVPSIFASSLLLLPATIM 292
+V++FE + + + Y V P++ +P I +L
Sbjct: 252 FIVVYFESMRVEIPLGYRGVTVRGS--------YPIRFLYVSNIPIILTFALYANIQLWA 303
Query: 293 GFIDVSSSPTWIVGLVDSLGHGRSF----------------------YMVLYSVFIVFFA 330
+D P + F Y++L +F + F
Sbjct: 304 RVLDRLGHPWLGRFDPTTGSPISGFVLYVIPPRNIFSVIDNPVRAIVYLILTVIFSLLFG 363
Query: 331 FFYTAIV-FNPKEAADNLKKHGGFIPGIRPGDRT-ALHIDYVLTRVTVVGAGYLVCVCIF 388
+ + + + + A L++ G IPG R RT + + VT G+ + + +
Sbjct: 364 YLWVELTGLDARSIARQLQRAGLQIPGFRRDPRTLEKVLQRYIPYVTFWGSLTVALIAVL 423
Query: 389 PEALIAVTGVPVSLSGTSLLIIVSVVLDTIVQIQGYLIAQQYEGVFK 435
+ L A+ +GT +L+ V ++ +I I + + + K
Sbjct: 424 ADFLGALG------TGTGILLTVGILYRFYEEIAREQITEMFPALRK 464