RPSBLAST alignment of GI: 254780241 and protein with PDBid: 1rh5

>1rh5_A Preprotein translocase SECY subunit; protein translocation, SECY, membrane protein, protein channels, protein transport; 3.20A {Methanocaldococcus jannaschii} SCOP: f.41.1.1 PDB: 1rhz_A 2yxq_A 3dkn_A 2yxr_A 3bo0_A 3bo1_A Length = 436

 Score =  269 bits (690), Expect = 7e-73
 Identities = 71/447 (15%), Positives = 163/447 (36%), Gaps = 59/447 (13%)

Query: 19  RAKDLKSRIVFTIIALIVYRFGTYIPLPSIDFISYSKAFQSKSAGIFGLFNMFSGGAVER 78
           +    K ++ +T I L++Y     I + +           ++   IF  +   +      
Sbjct: 19  KEITFKEKLKWTGIVLVLYFIMGCIDVYTAG---------AQIPAIFEFWQTITASR--I 67

Query: 79  MAVFSLGIMPYISASIIVQLIAATVPSLENLKKEGEQGRKVINQYTRYATVLLGILQAYG 138
             + +LGI P ++A II+QL+      +  +     + R +     +  ++++  ++A  
Sbjct: 68  GTLITLGIGPIVTAGIIMQLL--VGSGIIQMDLSIPENRALFQGCQKLLSIIMCFVEAVL 125

Query: 139 IAVGLKNGQGIVSDSDYFFVFSTIITLLGGTMFLVWLGEQITMRGIGNGVSLIIFSGIVA 198
                  G G          F  II +  G++ L++L E ++  GIG+G+ L I +G+  
Sbjct: 126 FV-----GAGAFGILTPLLAFLVIIQIAFGSIILIYLDEIVSKYGIGSGIGLFIAAGVSQ 180

Query: 199 GLP------SSLVSVLELGRVGSISTPLMLLIFSSTVAVIALVIFFERAQRRLLIQYPKR 252
            +          +       +  +     +     T+ V  +V++ E  +  + + + + 
Sbjct: 181 TIFVGALGPEGYLWKFLNSLIQGVPNIEYIAPIIGTIIVFLMVVYAECMRVEIPLAHGRI 240

Query: 253 QVGNRMFQDDVSYLPLKLNTAGVVPSIFASSLLLLPATIM-------------------- 292
           +     +       P+K      +P I A++L                            
Sbjct: 241 KGAVGKY-------PIKFVYVSNIPVILAAALFANIQLWGLALYRMGIPILGHYEGGRAV 293

Query: 293 -GFIDVSSSPTWIVGLVDSLGHGRSFYMVLYSVFIVFFAFFYTAIVFNPKEAADNLKKHG 351
            G     S+P  +  ++    H   + + +    ++F  F+      +PK  A  +   G
Sbjct: 294 DGIAYYLSTPYGLSSVISDPIHAIVYMIAMIITCVMFGIFWVETTGLDPKSMAKRIGSLG 353

Query: 352 GFIPGIRPGDRTALH-IDYVLTRVTVVGAGYLVCVCIFPEALIAVTGVPVSLSGTSLLII 410
             I G R  ++   H +   +  +TV+ + ++  +      + A+ G      GT +L+ 
Sbjct: 354 MAIKGFRKSEKAIEHRLKRYIPPLTVMSSAFVGFLATIANFIGALGG------GTGVLLT 407

Query: 411 VSVVLDTIVQIQGYLIAQQYEGVFKKS 437
           VS+V     Q+     ++ +  + K  
Sbjct: 408 VSIVYRMYEQLLRERTSELHPAIAKLL 434