RPSBLAST alignment of GI: 254780241 and protein with PDBid: 2ww9

>2ww9_A SEC sixty-one protein homolog; ribonucleoprotein, transmembrane, phosphoprotein, signal sequence, membrane, ribosome, cytoplasm; 8.60A {Saccharomyces cerevisiae} PDB: 2wwa_A Length = 490

 Score =  246 bits (630), Expect = 6e-66
 Identities = 73/484 (15%), Positives = 143/484 (29%), Gaps = 91/484 (18%)

Query: 19  RAKDLKSRIVFTIIALIVYRFGTYIPLPSIDFISYSKAFQSKSAGIFGLFNMFSGGAVER 78
                  +IV+TI A ++Y F    PL  +   +              ++ +      E 
Sbjct: 25  EKLPFDDKIVYTIFAGLIYLFAQ-FPLVGLPKATTPNVNDP-------IYFLRGVFGCEP 76

Query: 79  MAVFSLGIMPYISASIIVQLIAATVPSLENLKKEGEQGRKVINQYTRYATVLLGILQAYG 138
             +   G+ P IS+ +I+QL+      +  +  + +  R++    T+   ++  ++    
Sbjct: 77  RTLLEFGLFPNISSGLILQLL--AGLKVIKVNFKIQSDRELFQSLTKVFAIVQYVILTNI 134

Query: 139 IAVGLKNGQGIVSDSDYFFVFSTIITLLGGTMFLVWLGEQITMR-GIGNGVSLIIFSGIV 197
                        D     +      L+G  +F   L E I    G  +G  +I    I 
Sbjct: 135 FIFAG----YFGDDLSVVQIGLINFQLVGAGIFTTLLAEVIDKGFGFSSGAMIINTVVIA 190

Query: 198 AGLPSSLVSVLELGRVGSISTPLM--------------------------------LLIF 225
             L +    V ++       T                                   L   
Sbjct: 191 TNLVADTFGVSQIKVGEDDQTEAQGALINLIQGLRSKHKTFIGGIISAFNRDYLPNLTTT 250

Query: 226 SSTVAVIALVIFFERAQRRLLIQYPKRQVGNRMFQDDVSYLPLKLNTAGVVPSIFASSLL 285
              +A+  +V + +  +  L I+  + +  N       +  P+KL   G +  +F+ ++L
Sbjct: 251 IIVLAIAIIVCYLQSVRVELPIRSTRARGTN-------NVYPIKLLYTGCLSVLFSYTIL 303

Query: 286 LLPATIMGFIDVS----------------------------------SSPTWIVGLVDSL 311
                    +                                     + PT     V   
Sbjct: 304 FYIHIFAFVLIQLVAKNEPTHIICKIMGHYENANNLLAVPTFPLSLLAPPTSFFKGVTQQ 363

Query: 312 GHGRSFYMVLYSVFIVFFAFFYTAIV-FNPKEAADNLKKHGGFIPGIRPGDRTALHIDYV 370
                 Y     V  ++FA  + AI   + ++ A   K  G  + G R     A  ++ V
Sbjct: 364 PLTFITYSAFILVTGIWFADKWQAISGSSARDVALEFKDQGITLMGRREQ-NVAKELNKV 422

Query: 371 LTRVTVVGAGYLVCVCIFPEALIAV-TGVPVSLSGTSLLIIVSVVLDTIVQIQGYLIAQQ 429
           +    V GA  L  + +  E+L        + +       ++ V+     Q  G     Q
Sbjct: 423 IPIAAVTGASVLSLITVIGESLGLKGKAAGIVVGIAGGFSLLEVITIEYQQSGGQSALNQ 482

Query: 430 YEGV 433
             GV
Sbjct: 483 VLGV 486