RPSBLAST alignment of GI: 254780241 and protein with PDBid: 2wwb

>2wwb_A Protein transport protein SEC61 subunit alpha isoform 1; ribosome, protein EXIT tunnel, cotranslational protein translocation, protein conducting channel; 6.48A {Canis lupus familiaris} Length = 476

 Score =  255 bits (652), Expect = 2e-68
 Identities = 81/480 (16%), Positives = 154/480 (32%), Gaps = 93/480 (19%)

Query: 19  RAKDLKSRIVFTIIALIVYRFGTYIPLPSIDFISYSKAFQSKSAGIFGLFNMFSGGAVER 78
           R    K ++++T I L ++     IPL  I            S      + M    A  R
Sbjct: 24  RKIQFKEKVLWTAITLFIFLVCCQIPLFGIM----------SSDSADPFYWMRVILASNR 73

Query: 79  MAVFSLGIMPYISASIIVQLIAATVPSLENLKKEGEQGRKVINQYTRYATVLLGILQAYG 138
             +  LGI P +++ +I+QL+A           +  + R + N   +   +++ I Q+  
Sbjct: 74  GTLMELGISPIVTSGLIMQLLAGAKII---EVGDTPKDRALFNGAQKLFGMIITIGQSIV 130

Query: 139 IAVGLKNGQGIVSDSDYFFVFSTIITLLGGTMFLVWLGEQITMR-GIGNGVSLIIFSGIV 197
             +      G  S+          I L    + ++ L E +    G+G+G+SL I + I 
Sbjct: 131 YVMTG--MYGDPSEMGAGICLLITIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNIC 188

Query: 198 AGLPSSLVSVLELGRVGSISTP-----------------------------LMLLIFSST 228
             +     S   +     +                                  L+   +T
Sbjct: 189 ETIVWKAFSPTTVNTGRGMEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNLMNLIAT 248

Query: 229 VAVIALVIFFERAQRRLLIQYPKRQVGNRMFQDDVSYLPLKLNTAGVVPSIFASSLLLLP 288
           + V A+VI+F+  +  L I+  + +          +  P+KL     +P I  S+L+   
Sbjct: 249 IFVFAVVIYFQGFRVDLPIKSARYRGQY-------NTYPIKLFYTSNIPIILQSALVSNL 301

Query: 289 ATIMGFIDVSSSPTWIV---------------------GLVDSLGHGRSF---------- 317
             I   +    S   +V                     GL   L    SF          
Sbjct: 302 YVISQMLSARFSGNLLVSLLGTWSDTSSGGPARAYPVGGLCHYLSPPESFGSVLEDPVHA 361

Query: 318 --YMVLYSVFIVFFAFFYTAIV-FNPKEAADNLKKHGGFIPGIRPGDRTALHIDYVLTRV 374
             Y+V       FF+  +  +   + K+ A  LK+    + G R        ++  +   
Sbjct: 362 VVYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETS-MVHELNRYIPTA 420

Query: 375 TVVGAGYLVCVCIFPEALIAVTGVPVSLSGTSLLIIVSVVLDTIVQIQGYLIAQQYEGVF 434
              G   +  + +  + L A+        GT +L+ V+++                 G  
Sbjct: 421 AAFGGLCIGALSVLADFLGAIGS------GTGILLAVTIIYQYFEIFVKEQSEVGSMGAL 474