HHsearch alignment for GI: 254780242 and conserved domain: COG1727

>COG1727 RPL18A Ribosomal protein L18E [Translation, ribosomal structure and biogenesis].
Probab=98.87  E-value=1.4e-09  Score=70.42  Aligned_cols=77  Identities=22%  Similarity=0.404  Sum_probs=60.7

Q ss_pred             CCEEEECCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEEEEE
Q ss_conf             85301167635546565521477511204543024555332233555543086254433204630443144148999982
Q gi|254780242|r   54 MPLYRRLPKRGFVNIAGSDFVTISLGLLQAYIDKDRLDCSSEIDASVLVASGLVRRSQRGIRILSDGDLKAKVVLRVSGA  133 (151)
Q Consensus        54 ~Pl~rrlPKrGF~~~~~~~~~~iNL~~L~~~i~~~~~~~~~~Id~~~L~~~gli~~~~~~vKiLg~Gel~~ki~I~v~~~  133 (151)
T Consensus        29 a~iwk~vaerL~~--prr~ra~VnlsKI~r~ak-----~~d~v---------vV-----pGkVLg~g~l~~kVtVaAl~F   87 (122)
T COG1727          29 APIWKDVAERLEK--PRRNRAEVNVSKINRYAK-----EGDTV---------VV-----PGKVLGDGKLDKKVTVAALRF   87 (122)
T ss_pred             CHHHHHHHHHHHC--CCCCCCCEEHHHHHHHCC-----CCCEE---------EE-----EEEEECCCCCCCCEEEEEEEC
T ss_conf             7799999999835--434588463899996547-----99889---------99-----556844764236569999861


Q ss_pred             CHHHHHHHHHCCCEEEEC
Q ss_conf             699999999749889989
Q gi|254780242|r  134 SASAVEKVEKLGGQVIVI  151 (151)
Q Consensus       134 S~sA~ekIE~aGG~v~ii  151 (151)
T Consensus        88 S~~A~~KI~~aGGe~~tl  105 (122)
T COG1727          88 SKTAREKIEEAGGECLTL  105 (122)
T ss_pred             CHHHHHHHHHCCCEEEEH
T ss_conf             778999999729858649