HHsearch alignment for GI: 254780242 and conserved domain: pfam00828
>pfam00828 Ribosomal_L18e Ribosomal protein L18e/L15. This family includes eukaryotic L18 as well as prokaryotic L15.
Probab=100.00 E-value=0 Score=260.52 Aligned_cols=118 Identities=41% Similarity=0.669 Sum_probs=107.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC--CCCEEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHC
Q ss_conf 8985787766764236898664443168530116763554656--55214775112045430245553322335555430
Q gi|254780242|r 27 TGKTAGRGVKGQKSRSGVSVRGFEGGQMPLYRRLPKRGFVNIA--GSDFVTISLGLLQAYIDKDRLDCSSEIDASVLVAS 104 (151)
Q Consensus 27 ~Gkt~GrG~kGqk~Rsg~~~~gfEGGQ~Pl~rrlPKrGF~~~~--~~~~~~iNL~~L~~~i~~~~~~~~~~Id~~~L~~~ 104 (151)
T Consensus 3 ~Gkt~grG~kGqk~rsg~~~~~FeGGq~pl~rrlpKrGf~~~~~~~~~~~~inL~~l~~~~----~~~~~~~~~~~~~~~ 78 (122)
T pfam00828 3 IGKTRGRGRKGGRGRAGGQKHPFEGGQVPLYRRLGKRGFRRLFKSRKNRPPVNLSKLDRKM----LKDGEEVDGETLVVV 78 (122)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEEHHHHHHCC----CCCCCCCCHHHHHHC
T ss_conf 7564778887777789999988646866134433214766656675189998899954112----456551059999776
Q ss_pred CCCCCCCCCEEEECCCCCCCCEEEEEEEECHHHHHHHHHCCCEEEEC
Q ss_conf 86254433204630443144148999982699999999749889989
Q gi|254780242|r 105 GLVRRSQRGIRILSDGDLKAKVVLRVSGASASAVEKVEKLGGQVIVI 151 (151)
Q Consensus 105 gli~~~~~~vKiLg~Gel~~ki~I~v~~~S~sA~ekIE~aGG~v~ii 151 (151)
T Consensus 79 ~~~~---~~vKlLg~G~l~~~i~I~a~~~S~sA~e~Ie~aGG~v~~i 122 (122)
T pfam00828 79 GTVT---DDVKVLGNGELTKPLTVKALKFSKSAREKIEKAGGEVILL 122 (122)
T ss_pred CCCC---CCEEEEECCCCCCEEEEEEEECCHHHHHHHHHCCCEEEEC
T ss_conf 8665---3469985883473489999976999999999859989979