HHsearch alignment of GI: 254780242 and MMDB domain: 1vq8_L_

>1vq8_L (L:) 50S ribosomal protein L15P; ribosome 50S, protein-protein complex, RNA-RNA complex, protein-RNA complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui}
Probab=100.00  E-value=0  Score=260.32  Aligned_cols=136  Identities=21%  Similarity=0.219  Sum_probs=125.0

Q ss_pred             CCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEHHHHHHHHCCCC
Q ss_conf             987676102031578989857-8776676423689866444316853011676355465655214775112045430245
Q gi|254780242|r   11 GSCKVKKRVARGIGSGTGKTA-GRGVKGQKSRSGVSVRGFEGGQMPLYRRLPKRGFVNIAGSDFVTISLGLLQAYIDKDR   89 (151)
Q Consensus        11 g~~~~~kR~GRG~gsg~Gkt~-GrG~kGqk~Rsg~~~~gfEGGQ~Pl~rrlPKrGF~~~~~~~~~~iNL~~L~~~i~~~~   89 (151)
                      .++++++|+|||+|||+|+|+ ||||+||++|+     ||||||||||+|+||+||.+++...|.++||+.|+.|++.+.
T Consensus         2 ~s~~~k~R~gRg~gsG~gk~~~g~G~kG~~~r~-----Gfeggq~p~~~r~pK~Gf~~~~~~~~~~v~l~~l~~~~~~~~   76 (165)
T 1vq8_L            2 TSKKKRQRGSRTHGGGSHKNRRGAGHRGGRGDA-----GRDKHEFHNHEPLGKSGFKRPQKVQEEAATIDVREIDENVTL   76 (165)
T ss_dssp             CCHHHHCTTCSSTTCSSTTSSCSGGGGTSSTTT-----TTTTTTCTTSCCSCCCCCCCCGGGCCCEEEEEHHHHHHTTGG
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHH
T ss_conf             886366366757367999888989798888776-----988788714557422367677866534666315458888876


Q ss_pred             C------CCCCCCCHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEEEEECHHHHHHHHHCCCEEEEC
Q ss_conf             5------5332233555543086254433204630443144148999982699999999749889989
Q gi|254780242|r   90 L------DCSSEIDASVLVASGLVRRSQRGIRILSDGDLKAKVVLRVSGASASAVEKVEKLGGQVIVI  151 (151)
Q Consensus        90 ~------~~~~~Id~~~L~~~gli~~~~~~vKiLg~Gel~~ki~I~v~~~S~sA~ekIE~aGG~v~ii  151 (151)
                      +      +...+++.+.|...+++.....++||||+|+|+.||+|+|++||++|+++||+|||+|+++
T Consensus        77 ~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~KvLg~G~l~~~i~I~~~~~S~~A~~kIE~aGG~v~~~  144 (165)
T 1vq8_L           77 LAADDVAEVEDGGFRVDVRDVVEEADDADYVKVLGAGQVRHELTLIADDFSEGAREKVEGAGGSVELT  144 (165)
T ss_dssp             GTTSCCCC-----CEEEGGGTCTTCTTSSEEEEECCSCCCSCCEEEESEECHHHHHHHHHTTCEEEEC
T ss_pred             HCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEEEEEECCHHHHHHHHHCCCEEEEE
T ss_conf             30123101123301677887411334565279947883287879999972989999999859989994