HHsearch alignment of GI: 254780242 and MMDB domain: 2j01_P_
>2j01_P (P:) 50S ribosomal protein L15; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus}
Probab=100.00 E-value=0 Score=310.98 Aligned_cols=146 Identities=36% Similarity=0.515 Sum_probs=134.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CC-CCCCCCCCEEEECCCCCCCCCCCCCEEEEEH
Q ss_conf 976668889998767610203157898985787766764236898-66-4443168530116763554656552147751
Q gi|254780242|r 1 MKLNEISYDKGSCKVKKRVARGIGSGTGKTAGRGVKGQKSRSGVS-VR-GFEGGQMPLYRRLPKRGFVNIAGSDFVTISL 78 (151)
Q Consensus 1 m~L~~l~~~~g~~~~~kR~GRG~gsg~Gkt~GrG~kGqk~Rsg~~-~~-gfEGGQ~Pl~rrlPKrGF~~~~~~~~~~iNL 78 (151)
|+||||+|+||++++++|+|||+|||+|||||||||||++|+|.. .+ +|||||||||||+||+||+++++..|.++||
T Consensus 1 m~l~~L~~~~g~k~~kkR~gRg~gsG~Gkt~grG~kGq~~r~g~~~~~~~feggq~Pl~rr~pK~Gf~~~~~~~~~~~~l 80 (150)
T 2j01_P 1 MKLSDLRPNPGANKRRKRVGRGPGSGHGKTATRGHKGQKSRSGGLKDPRRFEGGRSTTLMRLPKRGMQGQVPGEIKRPRY 80 (150)
T ss_dssp ----CCSSSCCCSSCCCCCCCCSCSSSSSCTTCSSCCSSSCSSCCCCSSSCCSSSCTTCCSCCCCCSCCCSSCSCCCCCE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEHHCCCCCCEEEEEE
T ss_conf 96355888989863763666788899896699999898888888767741137887654147600010345542111343
Q ss_pred HHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEEEEECHHHHHHHHHCCCEEEEC
Q ss_conf 1204543024555332233555543086254433204630443144148999982699999999749889989
Q gi|254780242|r 79 GLLQAYIDKDRLDCSSEIDASVLVASGLVRRSQRGIRILSDGDLKAKVVLRVSGASASAVEKVEKLGGQVIVI 151 (151)
Q Consensus 79 ~~L~~~i~~~~~~~~~~Id~~~L~~~gli~~~~~~vKiLg~Gel~~ki~I~v~~~S~sA~ekIE~aGG~v~ii 151 (151)
..|+.+++.+.+ ++||++.|+++++++... .+|||++|++ .||+|+|++||++|+|+||+|||+|++|
T Consensus 81 ~~l~~~~~~~~~---~~i~~~~l~~~~~v~~~~-~vKlLg~G~~-~ki~i~v~~~S~~A~~kIe~aGG~v~~v 148 (150)
T 2j01_P 81 QGVNLKDLARFE---GEVTPELLVRAGLLKKGY-RLKILGEGEA-KPLKVVAHAFSKSALEKLKAAGGEPVLL 148 (150)
T ss_dssp EEEETTTTTTSC---SCCCTTTTTTSSSCSSCC-EEEEECSSCC-CSSCCCCSBCCHHHHHHHHTSCCCCCCC
T ss_pred EHHHHHHHHCCC---CCCCHHHHHHCCCCCCCC-CEEEECCCCE-EEEEEEEEECCHHHHHHHHHCCCEEEEE
T ss_conf 044566653344---335699999708655587-1788648857-6579998861899999999869989996