HHsearch alignment of GI: 254780242 and MMDB domain: 2zkr_l_
>2zkr_l (l:) 60S ribosomal protein L27A; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=100.00 E-value=2.4e-42 Score=240.78 Aligned_cols=135 Identities=21% Similarity=0.196 Sum_probs=113.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCEEEECC----CCCCCCC----CCCCEEEEEHHHHH
Q ss_conf 876761020315789898578776676423689866-44431685301167----6355465----65521477511204
Q gi|254780242|r 12 SCKVKKRVARGIGSGTGKTAGRGVKGQKSRSGVSVR-GFEGGQMPLYRRLP----KRGFVNI----AGSDFVTISLGLLQ 82 (151)
Q Consensus 12 ~~~~~kR~GRG~gsg~Gkt~GrG~kGqk~Rsg~~~~-gfEGGQ~Pl~rrlP----KrGF~~~----~~~~~~~iNL~~L~ 82 (151)
++++++|+|||++||.|+ +|||||++|+|...+ +|||||||||||+| |+||+++ ++.+|.+|||++|+
T Consensus 3 s~k~k~R~gRG~~sg~gg---~g~kgqk~r~g~~~~~gfeggq~p~~rr~Pk~~gk~Gf~~~~~~~~~~~~~~inl~~l~ 79 (148)
T 2zkr_l 3 SRLRKTRKLRGHVSHGHG---RIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMKHYHLKRNQSFCPTVNLDKPW 79 (148)
T ss_dssp ---CHHHHTTTTSCSSCC---SCSCC--CCSCSSSTTTTTTTCSSCTTTC------------------CCCCEEETHHHH
T ss_pred CCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHH
T ss_conf 887654657888786889---89898988989888786557643344668663256897788557765060057799998
Q ss_pred HHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEECCCCCC-CCEEEEEEEECHHHHHHHHHCCCEEEEC
Q ss_conf 54302455533223355554308625443320463044314-4148999982699999999749889989
Q gi|254780242|r 83 AYIDKDRLDCSSEIDASVLVASGLVRRSQRGIRILSDGDLK-AKVVLRVSGASASAVEKVEKLGGQVIVI 151 (151)
Q Consensus 83 ~~i~~~~~~~~~~Id~~~L~~~gli~~~~~~vKiLg~Gel~-~ki~I~v~~~S~sA~ekIE~aGG~v~ii 151 (151)
+|+|.+++|+...++...+ ..+.......+|||++|++. .||+|+|++||++|+++||+|||+|++|
T Consensus 80 ~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Kvlg~G~~~k~~i~I~v~~~S~~A~~~IE~aGG~v~~v 147 (148)
T 2zkr_l 80 TLVSEQTRVNAAKNKTGVA--PIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVGGACVLV 147 (148)
T ss_dssp HHTTTTTSSCTTTTEEEHH--HHSTTCSSSCCEEECCSCCCSSCCEEEESEECHHHHHHHHHTTCEEEEC
T ss_pred HHCCCCCEEHHHHHHCCCC--CCCCCCCCCEEEECCCCCCCCCCEEEEEEEECHHHHHHHHHCCCEEEEE
T ss_conf 6421341203344320542--1110000121576147740574689998861999999999869989995