HHsearch results for GI: 254780242 and protein with PDBid: 1vq8_L
>1vq8_L 50S ribosomal protein L15P; ribosome 50S, protein-protein complex, RNA-RNA complex, protein-RNA complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: c.12.1.1 PDB: 1vq4_L* 1vq5_L* 1vq6_L* 1vq7_L* 1s72_L* 1vq9_L* 1vqk_L* 1vql_L* 1vqm_L* 1vqn_L* 1vqo_L* 1vqp_L* 1yhq_L* 1yi2_L* 1yij_L* 1yit_L* 1yj9_L* 1yjn_L* 1yjw_L* 2otj_L* ...
Probab=91.40 E-value=0.12 Score=28.00 Aligned_cols=62 Identities=18% Similarity=0.118 Sum_probs=31.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEHHHHHH
Q ss_conf 99876761020315789898578776676423689866444316853011676355465655214775112045
Q gi|254780242|r 10 KGSCKVKKRVARGIGSGTGKTAGRGVKGQKSRSGVSVRGFEGGQMPLYRRLPKRGFVNIAGSDFVTISLGLLQA 83 (151)
Q Consensus 10 ~g~~~~~kR~GRG~gsg~Gkt~GrG~kGqk~Rsg~~~~gfEGGQ~Pl~rrlPKrGF~~~~~~~~~~iNL~~L~~ 83 (151)
.|+=+..+.-|||.-.+++. +|. +++ ++. ++|+|.+|.+|+..+.+..-..+...+|+.+..
T Consensus 14 ~G~G~~k~~~GrG~KGqk~R-sG~-~~~-----~~~-----~~~~~pkrGf~~~~~~~~~~~~inl~~L~~~~~ 75 (165)
T 1vq8_L 14 HGGGSHKNRRGAGHRGGRGD-AGR-DKH-----EFH-----NHEPLGKSGFKRPQKVQEEAATIDVREIDENVT 75 (165)
T ss_dssp TTCSSTTSSCSGGGGTSSTT-TTT-TTT-----TCT-----TSCCSCCCCCCCCGGGCCCEEEEEHHHHHHTTG
T ss_pred CCCCCCCCCCCCCCCCCCCC-CCC-CCC-----CCC-----CCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHH
T ss_conf 46799988898979998857-798-778-----886-----676697248888766522575413677888775