HHsearch results for GI: 254780242 and protein with PDBid: 2zjr_I

>2zjr_I 50S ribosomal protein L15; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: c.12.1.1 PDB: 1nwx_J* 1nwy_J* 1sm1_J* 1xbp_J* 2zjp_I* 2zjq_I 1nkw_J 3cf5_I* 3dll_I* 1pnu_J 1pny_J 1vor_M 1vou_M 1vow_M 1voy_M 1vp0_M
Probab=100.00  E-value=0  Score=337.24  Aligned_cols=142  Identities=47%  Similarity=0.722  Sum_probs=134.1

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCEEEECCCCCCCCCCCCCEEEEEHH
Q ss_conf             97666888999876761020315789898578776676423689866-44431685301167635546565521477511
Q gi|254780242|r    1 MKLNEISYDKGSCKVKKRVARGIGSGTGKTAGRGVKGQKSRSGVSVR-GFEGGQMPLYRRLPKRGFVNIAGSDFVTISLG   79 (151)
Q Consensus         1 m~L~~l~~~~g~~~~~kR~GRG~gsg~Gkt~GrG~kGqk~Rsg~~~~-gfEGGQ~Pl~rrlPKrGF~~~~~~~~~~iNL~   79 (151)
                      |+||||+|+|||+++++|+|||+| |+|||||||||||+||||+..+ +|||||||||||+|||||+|+ ..+|.+|||+
T Consensus         1 m~l~~l~~~~g~~k~rkr~grG~g-g~Gkt~GrG~KGqk~RsG~~~~~~feGGq~Pl~rr~PKrGF~~~-~~~~~~vnl~   78 (156)
T 2zjr_I            1 MKLHDLKPTPGSRKDRKRVGRGPG-GTDKTAGRGHKGQKSRSGAGKGAFFEGGRSRLIARLPKRGFNNV-GTTYEVVKLS   78 (156)
T ss_dssp             ---CCCCCCSSTTTCCCCSSSCCC-CCCSCSSSCCCCSSSSSCCSCCCSCSCCSSSSTTTSCCCCCCCC-CCCCCEECHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-CCEEEEEEHH
T ss_conf             952548889898337743668899-89977898888756577989888524686561330674588876-6416788878


Q ss_pred             HHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEEEEECHHHHHHHHHCCCEEEEC
Q ss_conf             204543024555332233555543086254433204630443144148999982699999999749889989
Q gi|254780242|r   80 LLQAYIDKDRLDCSSEIDASVLVASGLVRRSQRGIRILSDGDLKAKVVLRVSGASASAVEKVEKLGGQVIVI  151 (151)
Q Consensus        80 ~L~~~i~~~~~~~~~~Id~~~L~~~gli~~~~~~vKiLg~Gel~~ki~I~v~~~S~sA~ekIE~aGG~v~ii  151 (151)
                      .|+.+++       .+||++.|.+++||+...++||||++|+|+.+++|+|++||++|+++||+|||+|+|+
T Consensus        79 ~L~~~~~-------~~i~~~~L~~~~li~~~~~~VKiLg~Gel~~ki~I~~~~~S~sA~~~IE~aGG~V~l~  143 (156)
T 2zjr_I           79 QLQDLED-------TTFDRDTLEAYRLVRRKNRPVKLLASGEISRAVTVHVDAASAAAIKAVEAAGGRVVLP  143 (156)
T ss_dssp             HHTTSCC-------CCCCTTTTHHHHHCCCCSSCCEECCCCCCCCCCCCCCSEECHHHHHHHGGGSCCCCCC
T ss_pred             HHHCCCC-------CCHHHHHHHHHCEEECCCCCEEEECCCCCCCCEEEEEEEECHHHHHHHHHCCCEEEEE
T ss_conf             8320233-------3311566655161203676446750783557678999980999999999869989996