HHsearch results for GI: 254780242 and protein with PDBid: 2zkr_l

>2zkr_l 60S ribosomal protein L27A; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=100.00  E-value=1.5e-34  Score=199.41  Aligned_cols=137  Identities=18%  Similarity=0.164  Sum_probs=104.1

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--C-CCCCCCCCEEEECCCCCCCC-CCCCCEEEEEHHHHHHHHCC
Q ss_conf             87676102031578989857877667642368986--6-44431685301167635546-56552147751120454302
Q gi|254780242|r   12 SCKVKKRVARGIGSGTGKTAGRGVKGQKSRSGVSV--R-GFEGGQMPLYRRLPKRGFVN-IAGSDFVTISLGLLQAYIDK   87 (151)
Q Consensus        12 ~~~~~kR~GRG~gsg~Gkt~GrG~kGqk~Rsg~~~--~-gfEGGQ~Pl~rrlPKrGF~~-~~~~~~~~iNL~~L~~~i~~   87 (151)
                      .++++.|.+|+.|+|+.+ .+|||+||++|+|...  + +||++|||+|+++|+++|++ .++.+|.+|||++|+.+++.
T Consensus         6 kK~rk~Rg~r~~G~G~~g-~~rg~~g~~g~~gg~~~~~~~~~~~~~~~~~k~g~~~~~~~~~~~~~~~inL~~L~~~~~~   84 (148)
T 2zkr_l            6 RKTRKLRGHVSHGHGRIG-KHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMKHYHLKRNQSFCPTVNLDKPWTLVSE   84 (148)
T ss_dssp             CHHHHTTTTSCSSCCSCS-CC--CCSCSSSTTTTTTTCSSCTTTC------------------CCCCEEETHHHHHHTTT
T ss_pred             CCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHH
T ss_conf             764757789783899998-9898899998889875887665687876326589768886776417214539999876440


Q ss_pred             CCCCCCCCCCHHHHHHCCCCCCCCCCEEEECCCCCCC-CEEEEEEEECHHHHHHHHHCCCEEEEC
Q ss_conf             4555332233555543086254433204630443144-148999982699999999749889989
Q gi|254780242|r   88 DRLDCSSEIDASVLVASGLVRRSQRGIRILSDGDLKA-KVVLRVSGASASAVEKVEKLGGQVIVI  151 (151)
Q Consensus        88 ~~~~~~~~Id~~~L~~~gli~~~~~~vKiLg~Gel~~-ki~I~v~~~S~sA~ekIE~aGG~v~ii  151 (151)
                      ...+.....+.  +....+.......+|||++||++. +|+|+|++||++|+|+||+|||+|+||
T Consensus        85 ~~~~~~~~~~~--~~~~~~~~~~~g~~KlLg~G~~~kk~i~I~~~~~S~sA~ekIE~aGG~V~lv  147 (148)
T 2zkr_l           85 QTRVNAAKNKT--GVAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVGGACVLV  147 (148)
T ss_dssp             TTSSCTTTTEE--EHHHHSTTCSSSCCEEECCSCCCSSCCEEEESEECHHHHHHHHHTTCEEEEC
T ss_pred             CCEEHHHHHHC--CCCCEEEEECCCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHCCCEEEEE
T ss_conf             43102233213--5521001112422687158850462189998713989999999869889995