HHsearch results for GI: 254780242 and protein with PDBid: 2zkr_l
>2zkr_l 60S ribosomal protein L27A; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=98.49 E-value=2.1e-08 Score=63.17 Aligned_cols=67 Identities=22% Similarity=0.132 Sum_probs=46.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE--------ECCCCCCCCCCCCCE-EEEEHHHHH
Q ss_conf 87676102031578989857877667642368986644431685301--------167635546565521-477511204
Q gi|254780242|r 12 SCKVKKRVARGIGSGTGKTAGRGVKGQKSRSGVSVRGFEGGQMPLYR--------RLPKRGFVNIAGSDF-VTISLGLLQ 82 (151)
Q Consensus 12 ~~~~~kR~GRG~gsg~Gkt~GrG~kGqk~Rsg~~~~gfEGGQ~Pl~r--------rlPKrGF~~~~~~~~-~~iNL~~L~ 82 (151)
|+.+++|++|| |.|||+|++||.++.+.. .+++|||.|.+. .++++||.+++.... ..+++-.|+
T Consensus 3 sr~kK~rk~Rg-----~r~~G~G~~g~~rg~~g~-~g~~gg~~~~~~~~~~~~~~~~~k~g~~~~~~~~~~~~~~~inL~ 76 (148)
T 2zkr_l 3 SRLRKTRKLRG-----HVSHGHGRIGKHRKHPGG-RGNAGGMHHHRINFDKYHPGYFGKVGMKHYHLKRNQSFCPTVNLD 76 (148)
T ss_dssp ---CHHHHTTT-----TSCSSCCSCSCC--CCSC-SSSTTTTTTTCSSCTTTC------------------CCCCEEETH
T ss_pred CCCCCCCCCCC-----CCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHH
T ss_conf 88776475778-----978389999898988999-988898758876656878763265897688867764172145399
Q ss_pred HH
Q ss_conf 54
Q gi|254780242|r 83 AY 84 (151)
Q Consensus 83 ~~ 84 (151)
.+
T Consensus 77 ~L 78 (148)
T 2zkr_l 77 KP 78 (148)
T ss_dssp HH
T ss_pred HH
T ss_conf 99