HHsearch results for GI: 254780242 and protein with PDBid: 3jyw_O
>3jyw_O 60S ribosomal protein L18(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_O
Probab=98.33 E-value=1.3e-08 Score=64.27 Aligned_cols=79 Identities=18% Similarity=0.254 Sum_probs=57.1
Q ss_pred CEEEECCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEECCCCCCC--CEEEEEEE
Q ss_conf 5301167635546565521477511204543024555332233555543086254433204630443144--14899998
Q gi|254780242|r 55 PLYRRLPKRGFVNIAGSDFVTISLGLLQAYIDKDRLDCSSEIDASVLVASGLVRRSQRGIRILSDGDLKA--KVVLRVSG 132 (151)
Q Consensus 55 Pl~rrlPKrGF~~~~~~~~~~iNL~~L~~~i~~~~~~~~~~Id~~~L~~~gli~~~~~~vKiLg~Gel~~--ki~I~v~~ 132 (151)
|+++.+-||=|. .+.+..+|||+.|+.+.+..- .+++++ +| .=|||++|.+.. +++|-|-.
T Consensus 23 ~f~k~VakrL~~--sr~~r~~vnLski~r~~~~~~-~e~~~v---------VV-----~GkVl~dg~l~~vpkl~V~Al~ 85 (121)
T 3jyw_O 23 PFNKVVLKALFL--SKINRPPVSVSRIARALKQEG-AANKTV---------VV-----VGTVTDDARIFEFPKTTVAALR 85 (121)
T ss_dssp HHHHHHHHTTTS--CSTTSCCBCHHHHHHHTTTTS-CSSSEE---------EE-----SSCBCCCSCCCSSSCCCEECSS
T ss_pred HHHHHHHHHHHC--CCCCCCCCCHHHHHHHHHCCC-CCCCEE---------EE-----EEEECCCCEEECCCCEEEEEEE
T ss_conf 889999999837--544799714999999845447-779879---------99-----7237388214116762799986
Q ss_pred ECHHHHHHHHHCCCEEEE
Q ss_conf 269999999974988998
Q gi|254780242|r 133 ASASAVEKVEKLGGQVIV 150 (151)
Q Consensus 133 ~S~sA~ekIE~aGG~v~i 150 (151)
||++|+++|++|||+|..
T Consensus 86 fS~~Ar~kI~~aGG~~lt 103 (121)
T 3jyw_O 86 FTAGARAKIVKAGGECIT 103 (121)
T ss_dssp BCTTTTTHHHHHTCCBCC
T ss_pred CCHHHHHHHHHCCCEEEE
T ss_conf 257999999974997977