HHsearch results for GI: 254780242 and protein with PDBid: 3jyw_V

>3jyw_V 60S ribosomal protein L28; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_V
Probab=100.00  E-value=7.8e-34  Score=195.67  Aligned_cols=130  Identities=23%  Similarity=0.187  Sum_probs=100.7

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCEEEECC-----CCCCCC----CCCCCEEEEEHHHHHHHH
Q ss_conf             6102031578989857877667642368986-644431685301167-----635546----565521477511204543
Q gi|254780242|r   16 KKRVARGIGSGTGKTAGRGVKGQKSRSGVSV-RGFEGGQMPLYRRLP-----KRGFVN----IAGSDFVTISLGLLQAYI   85 (151)
Q Consensus        16 ~kR~GRG~gsg~Gkt~GrG~kGqk~Rsg~~~-~gfEGGQ~Pl~rrlP-----KrGF~~----~~~~~~~~iNL~~L~~~i   85 (151)
                      ++|++||     ++|||+||+||++|+|... +|||++|+|+|++.|     ++||.+    .++.+|.+|||++|+.++
T Consensus         2 K~rk~RG-----~~t~G~G~~gq~~~~gg~g~~g~~~~~~~~~~~~~~~~~~~~gfr~~~~~~~~~~~~~inl~~L~~~~   76 (142)
T 3jyw_V            2 KTRKHRG-----HVSAGKGRIGKHRKHPGGGMAGGEHHHRINMDKYHPGYFGKVGMRYFHKQQAHFWKPVLNLDKLWTLI   76 (142)
T ss_dssp             CHHHHHT-----TCCTTTCSTTCSTTTTTSSCCCSSCCSSSSCSSCSSSSSCCCSCCCSSSSTTCCCCCCCCHHHHHTTT
T ss_pred             CCCCCCC-----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHC
T ss_conf             7565538-----96847998989898976899987789887652688775477998788746533064258899998653


Q ss_pred             CCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEECCCCCCC-CEEEEEEEECHHHHHHHHHCCCEEEEC
Q ss_conf             024555332233555543086254433204630443144-148999982699999999749889989
Q gi|254780242|r   86 DKDRLDCSSEIDASVLVASGLVRRSQRGIRILSDGDLKA-KVVLRVSGASASAVEKVEKLGGQVIVI  151 (151)
Q Consensus        86 ~~~~~~~~~~Id~~~L~~~gli~~~~~~vKiLg~Gel~~-ki~I~v~~~S~sA~ekIE~aGG~v~ii  151 (151)
                      +...++....++...+.. .+.......+|||++||++. ||+|+|++||++|+|+||+|||+|++|
T Consensus        77 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~KlLg~Ge~~k~~i~I~a~~~S~sA~ekIE~aGG~v~~i  142 (142)
T 3jyw_V           77 PEDKRDQYLKSASKETAP-VIDTLAAGYGKILGKGRIPNVPVIVKARFVSKLAEEKIRAAGGVVELI  142 (142)
T ss_dssp             TTCCSSBTTTTBCCSTTT-CCSTTTSSCCCCCCCSCCCSCCCCEECSSCCHHHHHHHHHHTCCEECC
T ss_pred             CCCCCCHHHHHHHCCCCC-CCCCCCCCEEEEECCCCCCCCCEEEEEEECCHHHHHHHHHCCCEEEEC
T ss_conf             035431346553045542-100112434798337744667589998853989999999839989969