HHsearch results for GI: 254780242 and protein with PDBid: 3ofq_L
>3ofq_L 50S ribosomal protein L15; protein biosynthesis, ribosomes, RNA, tRNA, transfer, antibi EXIT, peptidyl, ribosomal subunit, large; 3.10A {Escherichia coli} PDB: 3fik_L 2wwq_L 3ofr_L* 3i1n_L 1p85_J 1p86_J 1vs8_L 1vs6_L 2aw4_L 2awb_L 1vt2_L 2i2v_L 2j28_L 2i2t_L* 2qao_L* 2qba_L* 2qbc_L* 2qbe_L 2qbg_L 2qbi_L* ...
Probab=100.00 E-value=0 Score=336.09 Aligned_cols=141 Identities=43% Similarity=0.628 Sum_probs=134.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCEEEECCCCCCCCCCCCCEEEEEHHH
Q ss_conf 7666888999876761020315789898578776676423689866-444316853011676355465655214775112
Q gi|254780242|r 2 KLNEISYDKGSCKVKKRVARGIGSGTGKTAGRGVKGQKSRSGVSVR-GFEGGQMPLYRRLPKRGFVNIAGSDFVTISLGL 80 (151)
Q Consensus 2 ~L~~l~~~~g~~~~~kR~GRG~gsg~Gkt~GrG~kGqk~Rsg~~~~-gfEGGQ~Pl~rrlPKrGF~~~~~~~~~~iNL~~ 80 (151)
+||||+|+|||+++++|+|||+|||+|+|||||||||+||||+.++ +|||||||||||+|||||++.+...|.++||++
T Consensus 1 kl~~l~~~~g~~k~~kR~gRG~gsg~Gkt~GrG~kGq~~Rsg~~~r~gfEGGq~Pl~rr~PK~Gf~~~~~~~~~~~~l~~ 80 (143)
T 3ofq_L 1 RLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRRLPKFGFTSRKAAITAEIRLSD 80 (143)
T ss_dssp CCSSCCCSTTCCCCCCCCSSCTTTTCTTTTSCCSSSTTTSSSCCCCTTCCSSSCCHHHHSCCCCCCCSSSSSEEECCTTS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEEEE
T ss_conf 96557789999557615667788998966888788887677989798636885624756652155543330368898600
Q ss_pred HHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEEEEECHHHHHHHHHCCCEEE
Q ss_conf 045430245553322335555430862544332046304431441489999826999999997498899
Q gi|254780242|r 81 LQAYIDKDRLDCSSEIDASVLVASGLVRRSQRGIRILSDGDLKAKVVLRVSGASASAVEKVEKLGGQVI 149 (151)
Q Consensus 81 L~~~i~~~~~~~~~~Id~~~L~~~gli~~~~~~vKiLg~Gel~~ki~I~v~~~S~sA~ekIE~aGG~v~ 149 (151)
|+.+ +.++||+++|++.+|+......||||+.|||+.||+|+|++||++|+++||+|||+|+
T Consensus 81 l~~~-------~~~~i~~~~L~~~gli~~~~~~vKvLg~Gel~~kl~I~v~~~S~sA~~~Ie~aGG~V~ 142 (143)
T 3ofq_L 81 LAKV-------EGGVVDLNTLKAANIIGIQIEFAKVILAGEVTTPVTVRGLRVTKGARAAIEAAGGKIE 142 (143)
T ss_dssp TTCS-------SSSCBCTTTTTTSSSSCTTCCEEECCCCSCCCSCCEECSSCCCSSSSTTTSTTTCEEC
T ss_pred HHHC-------CCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEEEEEECHHHHHHHHHHCCEEE
T ss_conf 2221-------1442038888750620244311278626834466699999819999999998298563