HHSEARCH alignment of GI: 254780242 and SCOP domain: d1vqol1

Alignment
>d1vqol1 c.12.1.1 (L:1-150) Ribosomal protein L15 (L15p) {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=100.00  E-value=4.2e-43  Score=242.73  Aligned_cols=135  Identities=22%  Similarity=0.262  Sum_probs=117.3

Q ss_pred             CCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC--CCCEEEEEHHHHHHHHCCC
Q ss_conf             8767610203157898985-787766764236898664443168530116763554656--5521477511204543024
Q gi|254780242|r   12 SCKVKKRVARGIGSGTGKT-AGRGVKGQKSRSGVSVRGFEGGQMPLYRRLPKRGFVNIA--GSDFVTISLGLLQAYIDKD   88 (151)
Q Consensus        12 ~~~~~kR~GRG~gsg~Gkt-~GrG~kGqk~Rsg~~~~gfEGGQ~Pl~rrlPKrGF~~~~--~~~~~~iNL~~L~~~i~~~   88 (151)
                      |+++++|+|||+|||+|+| +|||||||+||||+..++|||     |++||||||++++  ..+|.++||..|+.+++..
T Consensus         2 skk~k~R~gRg~G~G~~~~~~GrG~KGqk~rsG~~~~~f~g-----~~~lpK~g~~~~~~~~~~~~~inl~~L~~~~~~~   76 (150)
T d1vqol1           2 SKKKRQRGSRTHGGGSHKNRRGAGHRGGRGDAGRDKHEFHN-----HEPLGKSGFKRPQKVQEEAATIDVREIDENVTLL   76 (150)
T ss_dssp             CTGGGCTTCSSTTCSSTTSSSSGGGGTSSTTTTTTTTTCTT-----SCCSSCCCCCCCGGGCCCEEEEEHHHHHHTTTTC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHH
T ss_conf             96366567767578999887989888888766676688767-----7447721765555421156430288799888652


Q ss_pred             CC----CCCCCCCHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEEEEECHHHHHHHHHCCCEEEEC
Q ss_conf             55----5332233555543086254433204630443144148999982699999999749889989
Q gi|254780242|r   89 RL----DCSSEIDASVLVASGLVRRSQRGIRILSDGDLKAKVVLRVSGASASAVEKVEKLGGQVIVI  151 (151)
Q Consensus        89 ~~----~~~~~Id~~~L~~~gli~~~~~~vKiLg~Gel~~ki~I~v~~~S~sA~ekIE~aGG~v~ii  151 (151)
                      ..    +....++..+|.+..++.....+|||||.|+|+.||+|+|++||++|+|+||+|||+|+|+
T Consensus        77 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vKlLG~G~l~~~l~Ika~~~S~sA~ekIe~aGG~v~l~  143 (150)
T d1vqol1          77 AADDVAEVEDGGFRVDVRDVVEEADDADYVKVLGAGQVRHELTLIADDFSEGAREKVEGAGGSVELT  143 (150)
T ss_dssp             TTSCCCC-----CEEEGGGTCTTCSSSSEEEEECCSCCCSCCEEEESEECHHHHHHHHHTTCEEEEC
T ss_pred             CCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEEEEEECCHHHHHHHHHCCCEEEEE
T ss_conf             0244212233312677786344334565369961783176779999981999999999859989996


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribosomal proteins L15p and L18e
superfamily: Ribosomal proteins L15p and L18e
family: Ribosomal proteins L15p and L18e
domain: Ribosomal protein L15 (L15p)
species: Archaeon Haloarcula marismortui [TaxId: 2238]