HHSEARCH alignment of GI: 254780242 and SCOP domain: d1vqoo1

Alignment
>d1vqoo1 c.12.1.1 (O:1-115) Ribosomal protein L18e {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=99.14  E-value=2.6e-11  Score=77.04  Aligned_cols=75  Identities=17%  Similarity=0.341  Sum_probs=56.6

Q ss_pred             CEEEECCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEEEEEC
Q ss_conf             53011676355465655214775112045430245553322335555430862544332046304431441489999826
Q gi|254780242|r   55 PLYRRLPKRGFVNIAGSDFVTISLGLLQAYIDKDRLDCSSEIDASVLVASGLVRRSQRGIRILSDGDLKAKVVLRVSGAS  134 (151)
Q Consensus        55 Pl~rrlPKrGF~~~~~~~~~~iNL~~L~~~i~~~~~~~~~~Id~~~L~~~gli~~~~~~vKiLg~Gel~~ki~I~v~~~S  134 (151)
                      |+++.+-+|=  ..++..+.+|||++|+.+...     ++++         +     .+.||||+|+++.+++|.|+.||
T Consensus        24 ~iwk~va~rL--~~~rr~r~~VnLski~~~~k~-----~~~v---------v-----vpgKVLg~G~l~~k~~V~A~~fS   82 (115)
T d1vqoo1          24 AVWGDVAERL--EKPRRTHAEVNLGRIERYAQE-----DETV---------V-----VPGKVLGSGVLQKDVTVAAVDFS   82 (115)
T ss_dssp             SHHHHHHHHH--HSCGGGSEEEEHHHHHHHCCT-----TSEE---------E-----EEEEEECCSCCCSCCEEEEEEEC
T ss_pred             HHHHHHHHHH--HCCCCCCCCCCHHHHHHHCCC-----CCEE---------E-----EEEEEECCCEECCCEEEEEEECC
T ss_conf             8999999998--435446887569999974658-----9989---------9-----96689636587578899985117


Q ss_pred             HHHHHHHHHCCCEEEE
Q ss_conf             9999999974988998
Q gi|254780242|r  135 ASAVEKVEKLGGQVIV  150 (151)
Q Consensus       135 ~sA~ekIE~aGG~v~i  150 (151)
                      ++|+++||+|||.+++
T Consensus        83 ~sA~~kI~~aGg~iti   98 (115)
T d1vqoo1          83 GTAETKIDQVGEAVSL   98 (115)
T ss_dssp             HHHHHHHHHHSEEEEH
T ss_pred             HHHHHHHHHCCCEEEH
T ss_conf             8999999980988988


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribosomal proteins L15p and L18e
superfamily: Ribosomal proteins L15p and L18e
family: Ribosomal proteins L15p and L18e
domain: Ribosomal protein L18e
species: Archaeon Haloarcula marismortui [TaxId: 2238]