PSIBLAST alignment of GI: 254780242 and protein with PDB id: 1ffk
>gi|10120929|pdb|1FFK|J Chain J, Crystal Structure Of The Large Ribosomal Subunit From Haloarcula Marismortui At 2.4 Angstrom Resolution Length = 164
>gi|14278045|pdb|1GIY|O Chain O, Crystal Structure Of The Ribosome At 5.5 A Resolution. This File, 1giy, Contains The 50s Ribosome Subunit. The 30s Ribosome Subunit, Three Trna, And Mrna Molecules Are In The File 1gix Length = 164
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 54/151 (35%), Gaps = 22/151 (14%)
Query: 12 SCKVKKRVARGIGSGTGKT------------AGRGVKGQKSRSGVSVRGFEGGQMPLYRR 59
S K ++R +R G G+ K AGR K + G G + P ++
Sbjct: 2 SKKKRQRGSRTHGGGSHKNRRGAGHRGGRGDAGR-DKHEFH--NHEPLGKSGFKRP--QK 56
Query: 60 LPKRGFVNIAGSDFVTISLGLLQAYIDKDRLDCSSEIDASVLVASGLVRRSQRGIRILSD 119
+ + ++L + + D +D +V +++L
Sbjct: 57 VQEEAATIDVREIDENVTLLAADDVAEVE--DGGFRVDVRDVVEEA---DDADYVKVLGA 111
Query: 120 GDLKAKVVLRVSGASASAVEKVEKLGGQVIV 150
G ++ ++ L S A EKVE GG V +
Sbjct: 112 GQVRHELTLIADDFSEGAREKVEGAGGSVEL 142