RPSBLAST alignment of GI: 254780242 and protein with PDBid: 3ofq
>3ofq_L 50S ribosomal protein L15; protein biosynthesis, ribosomes, RNA, tRNA, transfer, antibi EXIT, peptidyl, ribosomal subunit, large; 3.10A {Escherichia coli} PDB: 3fik_L 2wwq_L 3ofr_L* 3i1n_L 1p85_J 1p86_J 1vs8_L 1vs6_L 2aw4_L 2awb_L 1vt2_L 2i2v_L 2j28_L 2i2t_L* 2qao_L* 2qba_L* 2qbc_L* 2qbe_L 2qbg_L 2qbi_L* ... Length = 143
Score = 128 bits (322), Expect = 6e-31
Identities = 60/148 (40%), Positives = 81/148 (54%), Gaps = 8/148 (5%)
Query: 2 KLNEISYDKGSCKVKKRVARGIGSGTGKTAGRGVKGQKSRSGVSVR-GFEGGQMPLYRRL 60
+LN +S +GS K KR+ RGIGSG GKT GRG KGQKSRSG VR GFEGGQMPLYRRL
Sbjct: 1 RLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRRL 60
Query: 61 PKRGFVNIAGSDFVTISLGLLQAYIDKDRLDCSSEIDASVLVASGLVRRSQRGIRILSDG 120
PK GF + + I L L +D + L A+ ++ +++ G
Sbjct: 61 PKFGFTSRKAAITAEIRLSDLAKV-------EGGVVDLNTLKAANIIGIQIEFAKVILAG 113
Query: 121 DLKAKVVLRVSGASASAVEKVEKLGGQV 148
++ V +R + A +E GG++
Sbjct: 114 EVTTPVTVRGLRVTKGARAAIEAAGGKI 141