HHsearch alignment for GI: 254780244 and conserved domain: PTZ00070
>PTZ00070 40S ribosomal protein S2; Provisional.
Probab=100.00 E-value=2.8e-45 Score=296.94 Aligned_cols=146 Identities=32% Similarity=0.428 Sum_probs=137.4
Q ss_pred CCEEEEEEECCCCEECCCCEEEEEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHCEEEEECC-------CCCCC
Q ss_conf 60210000224440127873846799999808998389970474424789999999996301252201-------66876
Q gi|254780244|r 21 SIVDRIVAINRVSTALPGGRRFAFSVLVVVGDTKSKVGFAHSTAREVPEAVRKATEAAKRNMISVSLL-------DGRTL 93 (199)
Q Consensus 21 ~l~ekvi~v~RV~k~tkgGr~~sf~alvvvGn~~G~vG~G~GKa~ev~~Ai~KA~~~Akknli~V~~~-------~~~TI 93 (199)
T Consensus 83 ~LkdEVl~I~~VQKqT~aGqrtrFka~VvVGd~nG~VGlG~~kskEV~~AIrkAi~~AKlniipVrrG~W~~~~g~pHTV 162 (261)
T PTZ00070 83 QLKDEVMKIVPVQKQTSAGQRTRFKAFVVVGDGNGHIGLGAKVAKEVALAIRGAMIAAKLNLVPVRRGYWGNKIGEPHTV 162 (261)
T ss_pred CHHHHHHHHHHHEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCC
T ss_conf 01556421142101012575257899999726888515551211014788999999753255455324446788999854
Q ss_pred CEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEECCC-CCHHHHHHHHHHHHHCCC---CHHHHH
Q ss_conf 2001103376799996367544850304899999980944100454689-888899999999995069---989999
Q gi|254780244|r 94 HHDGVGRHGAGKVIMRSAMAGTGVIAGGAIRAVCEVLGMHDVVAKSIGS-SNPHNVIRATFEVLRSQS---HPRDVA 166 (199)
Q Consensus 94 ~h~v~gk~g~~kV~l~Pap~G~Gi~a~~~vr~il~laGI~dv~aK~~GS-~N~~NvvkAt~~AL~~~~---t~~~iA 166 (199)
T Consensus 163 P~kVtGk~GSv~V~L~PAPrGtGiVag~v~KklL~lAGI~Dv~T~s~G~T~T~~NfaKATf~Al~kTYs~lTPdlW~ 239 (261)
T PTZ00070 163 PMKVTGKCGSVRVRLVPAPRGTGIVAAPTPKKILEFAGVEDVYTSSRGKTRTRGNFIMATFYALKKTYGFLTPDLWA 239 (261)
T ss_pred CEEEEEEECCEEEEEEECCCCCEEEECHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHC
T ss_conf 34889886737899876799961674608689998636440553067656320248999999999876164966622