HHsearch results for GI: 254780244 and protein with PDBid: 1pkp_A

>1pkp_A Ribosomal protein S5; 2.80A {Geobacillus stearothermophilus} SCOP: d.14.1.1 d.50.1.2 PDB: 1eg0_B 1dv4_E* 1qd7_D
Probab=100.00  E-value=0  Score=359.74  Aligned_cols=146  Identities=49%  Similarity=0.829  Sum_probs=141.4

Q ss_pred             CCCCCCCEEEEEEECCCCEECCCCEEEEEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHCEEEEECCCCCCCCE
Q ss_conf             00011602100002244401278738467999998089983899704744247899999999963012522016687620
Q gi|254780244|r   16 EERDNSIVDRIVAINRVSTALPGGRRFAFSVLVVVGDTKSKVGFAHSTAREVPEAVRKATEAAKRNMISVSLLDGRTLHH   95 (199)
Q Consensus        16 ~~~~~~l~ekvi~v~RV~k~tkgGr~~sf~alvvvGn~~G~vG~G~GKa~ev~~Ai~KA~~~Akknli~V~~~~~~TI~h   95 (199)
                      +..+.||+|+||+|+||+|||++||++||+|||+|||+||+||||+|||.|+++||+||.++|++||++||++ ++||||
T Consensus         5 ~~~~~~l~e~vi~i~rV~kvtkgGr~~~f~alVvvGn~~G~vG~G~GKa~ev~~Ai~KA~~~Ak~nl~~V~~~-~~Ti~h   83 (150)
T 1pkp_A            5 NPNKLELEERVVAVNRVAKVVKGGRRLRFSALVVVGDKNGHVGFGTGKAQEVPEAIRKAIEDAKKNLIEVPIV-GTTIPH   83 (150)
T ss_dssp             CGGGSCCEEEEEEEECSSSBCSSCCSSCEEEEEEEECSSSEEEEEEEEESSHHHHHHHHHHHHTTSCEECCCB-TTBCSS
T ss_pred             CCCCCCCEEEEEEEEEEEEEECCCCEEEEEEEEEEECCCCCCCCCEEECCCHHHHHHHHHHHHHHCEEEEECC-CCCCCE
T ss_conf             7775773079999962334841882588999999956998671241215767899999999997376997204-897568


Q ss_pred             ECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCH
Q ss_conf             0110337679999636754485030489999998094410045468988889999999999506998
Q gi|254780244|r   96 DGVGRHGAGKVIMRSAMAGTGVIAGGAIRAVCEVLGMHDVVAKSIGSSNPHNVIRATFEVLRSQSHP  162 (199)
Q Consensus        96 ~v~gk~g~~kV~l~Pap~G~Gi~a~~~vr~il~laGI~dv~aK~~GS~N~~NvvkAt~~AL~~~~t~  162 (199)
                      +++++||+++|+|+|||+|+||+|++.++.||+++||+||++|++||+||+|+++|||+||++|+|.
T Consensus        84 ~v~gk~gs~kV~l~Pap~G~Gl~a~~~vr~il~laGI~d~~~K~~Gs~n~~NvvkAt~~aL~~~~ta  150 (150)
T 1pkp_A           84 EVIGHFGAGEIILKPASEGTGVIAGGPARAVLELAGISDILSKSIGSNTPINMVRATFDGLKQLKRA  150 (150)
T ss_dssp             CEEEEETTEEEEEEECCTTCCEESCHHHHHHHHHHTCCSEEEEECSCCSHHHHHHHHHHHHHHCC--
T ss_pred             EEEEEECCEEEEEEECCCCCCEEECHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf             9999977588999848999666826178999987491505423577896899999999999974339