HHsearch results for GI: 254780244 and protein with PDBid: 1pkp_A
>1pkp_A Ribosomal protein S5; 2.80A {Geobacillus stearothermophilus} SCOP: d.14.1.1 d.50.1.2 PDB: 1eg0_B 1dv4_E* 1qd7_D
Probab=100.00 E-value=0 Score=359.74 Aligned_cols=146 Identities=49% Similarity=0.829 Sum_probs=141.4
Q ss_pred CCCCCCCEEEEEEECCCCEECCCCEEEEEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHCEEEEECCCCCCCCE
Q ss_conf 00011602100002244401278738467999998089983899704744247899999999963012522016687620
Q gi|254780244|r 16 EERDNSIVDRIVAINRVSTALPGGRRFAFSVLVVVGDTKSKVGFAHSTAREVPEAVRKATEAAKRNMISVSLLDGRTLHH 95 (199)
Q Consensus 16 ~~~~~~l~ekvi~v~RV~k~tkgGr~~sf~alvvvGn~~G~vG~G~GKa~ev~~Ai~KA~~~Akknli~V~~~~~~TI~h 95 (199)
+..+.||+|+||+|+||+|||++||++||+|||+|||+||+||||+|||.|+++||+||.++|++||++||++ ++||||
T Consensus 5 ~~~~~~l~e~vi~i~rV~kvtkgGr~~~f~alVvvGn~~G~vG~G~GKa~ev~~Ai~KA~~~Ak~nl~~V~~~-~~Ti~h 83 (150)
T 1pkp_A 5 NPNKLELEERVVAVNRVAKVVKGGRRLRFSALVVVGDKNGHVGFGTGKAQEVPEAIRKAIEDAKKNLIEVPIV-GTTIPH 83 (150)
T ss_dssp CGGGSCCEEEEEEEECSSSBCSSCCSSCEEEEEEEECSSSEEEEEEEEESSHHHHHHHHHHHHTTSCEECCCB-TTBCSS
T ss_pred CCCCCCCEEEEEEEEEEEEEECCCCEEEEEEEEEEECCCCCCCCCEEECCCHHHHHHHHHHHHHHCEEEEECC-CCCCCE
T ss_conf 7775773079999962334841882588999999956998671241215767899999999997376997204-897568
Q ss_pred ECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCH
Q ss_conf 0110337679999636754485030489999998094410045468988889999999999506998
Q gi|254780244|r 96 DGVGRHGAGKVIMRSAMAGTGVIAGGAIRAVCEVLGMHDVVAKSIGSSNPHNVIRATFEVLRSQSHP 162 (199)
Q Consensus 96 ~v~gk~g~~kV~l~Pap~G~Gi~a~~~vr~il~laGI~dv~aK~~GS~N~~NvvkAt~~AL~~~~t~ 162 (199)
+++++||+++|+|+|||+|+||+|++.++.||+++||+||++|++||+||+|+++|||+||++|+|.
T Consensus 84 ~v~gk~gs~kV~l~Pap~G~Gl~a~~~vr~il~laGI~d~~~K~~Gs~n~~NvvkAt~~aL~~~~ta 150 (150)
T 1pkp_A 84 EVIGHFGAGEIILKPASEGTGVIAGGPARAVLELAGISDILSKSIGSNTPINMVRATFDGLKQLKRA 150 (150)
T ss_dssp CEEEEETTEEEEEEECCTTCCEESCHHHHHHHHHHTCCSEEEEECSCCSHHHHHHHHHHHHHHCC--
T ss_pred EEEEEECCEEEEEEECCCCCCEEECHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 9999977588999848999666826178999987491505423577896899999999999974339