HHsearch results for GI: 254780244 and protein with PDBid: 2vqe_E
>2vqe_E 30S ribosomal protein S5; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: i.1.1.3 PDB: 1fka_E 1gix_H* 1hnw_E* 1hnx_E* 1hnz_E* 1hr0_E 1ibk_E* 1ibl_E* 1ibm_E 1jgo_H* 1jgp_H* 1jgq_H* 1ml5_H* 1xmo_E* 1xmq_E* 1xnq_E* 1xnr_E* 1yl4_H 2b64_E* 2b9m_E* ...
Probab=100.00 E-value=0 Score=372.95 Aligned_cols=158 Identities=39% Similarity=0.603 Sum_probs=153.6
Q ss_pred CCCCCEEEEEEECCCCEECCCCEEEEEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHCEEEEECCCCCCCCEEC
Q ss_conf 01160210000224440127873846799999808998389970474424789999999996301252201668762001
Q gi|254780244|r 18 RDNSIVDRIVAINRVSTALPGGRRFAFSVLVVVGDTKSKVGFAHSTAREVPEAVRKATEAAKRNMISVSLLDGRTLHHDG 97 (199)
Q Consensus 18 ~~~~l~ekvi~v~RV~k~tkgGr~~sf~alvvvGn~~G~vG~G~GKa~ev~~Ai~KA~~~Akknli~V~~~~~~TI~h~v 97 (199)
.+++|+|+||+|+||+|||++||++||+|||+|||+||+||||+||++|+++||+||.++|++||++||+.+ +||||++
T Consensus 2 ~~~~~~e~vl~i~rv~k~tk~Gr~~~f~alVvvGd~~G~vG~G~gKa~ev~~Ai~kA~~~A~~nl~~v~~~~-~Ti~h~v 80 (162)
T 2vqe_E 2 PETDFEEKMILIRRTARMQAGGRRFRFGALVVVGDRQGRVGLGFGKAPEVPLAVQKAGYYARRNMVEVPLQN-GTIPHEI 80 (162)
T ss_dssp ---CCEEEEEEEEEEEEEETTEEEEEEEEEEEEECSSSEEEEEEEEESSHHHHHHHHHHHHTTSEEECCCST-TSCSSCE
T ss_pred CCCCCEEEEEEEEEEEEEECCCCEEEEEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHCEEEEECCC-CCCCEEE
T ss_conf 854720168988203348128944789999999579997714245575459999999999972728993447-9665630
Q ss_pred CCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHH
Q ss_conf 1033767999963675448503048999999809441004546898888999999999950699899998619979894
Q gi|254780244|r 98 VGRHGAGKVIMRSAMAGTGVIAGGAIRAVCEVLGMHDVVAKSIGSSNPHNVIRATFEVLRSQSHPRDVANRRGIKHSLL 176 (199)
Q Consensus 98 ~gk~g~~kV~l~Pap~G~Gi~a~~~vr~il~laGI~dv~aK~~GS~N~~NvvkAt~~AL~~~~t~~~iA~~RG~~i~~~ 176 (199)
.++|++++|+|+|||+|+||+|++.++.||+++||+||++|++||+||+|+++|||+||++++||+|||+.||+++.+.
T Consensus 81 ~~k~ga~~V~l~Pap~G~Gi~a~~~ir~il~laGI~D~~~k~~Gs~n~~NvvkAt~~aL~~~~t~~~ia~~Rgkk~~~~ 159 (162)
T 2vqe_E 81 EVEFGASKIVLKPAAPGTGVIAGAVPRAILELAGVTDILTKELGSRNPINIAYATMEALRQLRTKADVERLRKGEAHAQ 159 (162)
T ss_dssp EEEETTEEEEEEECCTTSCEESCHHHHHHHHTTTCCSEEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHTCC-----
T ss_pred EEEECCEEEEEEECCCCCCEECCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHH
T ss_conf 0275210799974699987452708999999759261256646789789999999999982899999999818981675