HHsearch results for GI: 254780244 and protein with PDBid: 3jyv_E

>3jyv_E 40S ribosomal protein S2; eukaryotic ribosome, RACK1 protein, flexible fitting; HET: 2MG H2U M2G OMC OMG YYG PSU 5MC 7MG 5MU 1MA; 8.90A {Thermomyces lanuginosus} PDB: 1s1h_E
Probab=100.00  E-value=0  Score=342.31  Aligned_cols=149  Identities=28%  Similarity=0.434  Sum_probs=142.0

Q ss_pred             CCEEEEEEECCCCEECCCCEEEEEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHCEEEEECC-------CCCCC
Q ss_conf             60210000224440127873846799999808998389970474424789999999996301252201-------66876
Q gi|254780244|r   21 SIVDRIVAINRVSTALPGGRRFAFSVLVVVGDTKSKVGFAHSTAREVPEAVRKATEAAKRNMISVSLL-------DGRTL   93 (199)
Q Consensus        21 ~l~ekvi~v~RV~k~tkgGr~~sf~alvvvGn~~G~vG~G~GKa~ev~~Ai~KA~~~Akknli~V~~~-------~~~TI   93 (199)
                      +|+|+||+|+||||||++||++||+|||+|||+||+||||+|||.|+++||+||..+|++||++|+++       ++|||
T Consensus         1 gl~ekvl~v~rV~k~tkgGr~~~F~alVvVGn~~G~vG~G~gKa~ev~~Ai~kA~~~Ak~nli~v~~~~~~~~~~~~hti   80 (162)
T 3jyv_E            1 GLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAKLSVIPIRRGYWGTNLGQPHSL   80 (162)
T ss_dssp             CCEEEEEEEECCEEECSSSEEECEEEEEEEECSSSEEEEEEEEESSHHHHHHHHHHHTTTSEEEBCBSBSSSBSSBTTSC
T ss_pred             CCCEEEEEEEEEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCEEE
T ss_conf             97418999840003824895378899999955998476320105646788999999996013665035556779998189


Q ss_pred             CEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEECCC-CCHHHHHHHHHHHHHCCC---CHHHHHHHC
Q ss_conf             2001103376799996367544850304899999980944100454689-888899999999995069---989999861
Q gi|254780244|r   94 HHDGVGRHGAGKVIMRSAMAGTGVIAGGAIRAVCEVLGMHDVVAKSIGS-SNPHNVIRATFEVLRSQS---HPRDVANRR  169 (199)
Q Consensus        94 ~h~v~gk~g~~kV~l~Pap~G~Gi~a~~~vr~il~laGI~dv~aK~~GS-~N~~NvvkAt~~AL~~~~---t~~~iA~~R  169 (199)
                      ||+++++|++++|+|+|||+|+||+|++.++.||+++||+||++|++|| +|++|+++|||+||.+++   ||+++++++
T Consensus        81 ~~~~~gk~gs~~v~l~pap~G~Gl~a~~~~r~il~laGI~D~~~k~~Gst~~~~N~~kAt~~aL~~~~s~~tP~~~~e~~  160 (162)
T 3jyv_E           81 ATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVEDVYTQSNGKTRTLENTLKAAFVAIGNTYGFLTPNLWAEQP  160 (162)
T ss_dssp             SSCCEEESSSEEEEEEECCTTCCBCCCTTTHHHHHHHTCCSEEEEEEECCCTTTHHHHHHHTTSSBSSSCCCSSHHHHSS
T ss_pred             EEEEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCC
T ss_conf             99885688626999966999858747738999998669466987735588974278999999999746359989997668