HHsearch results for GI: 254780244 and protein with PDBid: 3ofo_E
>3ofo_E 30S ribosomal protein S5; protein biosynthesis, ribosomes, RNA, tRNA, transfer, eryThr ketolide, macrolide, antibiotic, EXIT, peptidyl; 3.10A {Escherichia coli} PDB: 3fih_E* 3iy8_E 2wwl_E 3ofp_E 2qal_E* 1p6g_E 1p87_E 2aw7_E 2avy_E 2i2u_E 2i2p_E* 2qan_E* 2qb9_E* 2qbb_E* 2qbd_E 2qbf_E 2qbh_E* 2qbj_E* 2qou_E* 2qow_E* ...
Probab=100.00 E-value=0 Score=363.70 Aligned_cols=150 Identities=50% Similarity=0.798 Sum_probs=147.7
Q ss_pred CCEEEEEEECCCCEECCCCEEEEEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHCEEEEECCCCCCCCEECCCC
Q ss_conf 60210000224440127873846799999808998389970474424789999999996301252201668762001103
Q gi|254780244|r 21 SIVDRIVAINRVSTALPGGRRFAFSVLVVVGDTKSKVGFAHSTAREVPEAVRKATEAAKRNMISVSLLDGRTLHHDGVGR 100 (199)
Q Consensus 21 ~l~ekvi~v~RV~k~tkgGr~~sf~alvvvGn~~G~vG~G~GKa~ev~~Ai~KA~~~Akknli~V~~~~~~TI~h~v~gk 100 (199)
||+|+||+|+||+|||++||++||+|||+|||+||++|||.||+.|+++|++||.++|++||++|++.+ +||||++.++
T Consensus 1 el~e~vl~i~rv~k~t~~Gr~~~f~alvvvGn~~G~vG~G~gKa~ev~~Ai~kA~~~Ak~nl~~v~~~~-~Ti~~~~~~k 79 (150)
T 3ofo_E 1 ELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNGRVGFGYGKAREVPAAIQKAMEKARRNMINVALNN-GTLQHPVKGV 79 (150)
T ss_dssp CCCEEEEEEECCCCCBTTBCCCCCEEEEEEECSSSCEEEECCBCSSHHHHHHHHHHHHHSSEECCCCBT-TBCSSCEEEE
T ss_pred CCCEEEEEEEEEEEEECCCCEEEEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEECCCC-CCCCCCCCCE
T ss_conf 952168878404346048854689999999669985886101176579999999999984935502457-7556445604
Q ss_pred CCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCC
Q ss_conf 37679999636754485030489999998094410045468988889999999999506998999986199
Q gi|254780244|r 101 HGAGKVIMRSAMAGTGVIAGGAIRAVCEVLGMHDVVAKSIGSSNPHNVIRATFEVLRSQSHPRDVANRRGI 171 (199)
Q Consensus 101 ~g~~kV~l~Pap~G~Gi~a~~~vr~il~laGI~dv~aK~~GS~N~~NvvkAt~~AL~~~~t~~~iA~~RG~ 171 (199)
|++++|+|+|||+|+||+||+.+++||+++||+||++|++||+||+|+++|||+||++++||+++|+.|||
T Consensus 80 ~~~~~v~l~Pap~G~Gl~a~~~~~~il~laGi~d~~~K~~Gs~n~~n~vkA~~~aL~~~~s~~~ia~~rGK 150 (150)
T 3ofo_E 80 HTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGK 150 (150)
T ss_dssp ETTEEEEEECSCCSSSCBSCSSSSHHHHHHTCCSCEEEEEECCCHHHHHHHHHHHHHSCCCSTTGGGTTTC
T ss_pred EECCEEEEEECCCCCCCEECHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCC
T ss_conf 30113688718989785307788999998276506211679996899999999999807999999997385