HHSEARCH alignment of GI: 254780244 and SCOP domain: d1pkpa2

Alignment

Probab=99.89  E-value=3.7e-24  Score=164.85  Aligned_cols=72  Identities=50%  Similarity=0.827  Sum_probs=69.0

Q ss_pred             CCCCCCEEEEEEECCCCEECCCCEEEEEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHCEEEEECC
Q ss_conf             001160210000224440127873846799999808998389970474424789999999996301252201
Q gi|254780244|r   17 ERDNSIVDRIVAINRVSTALPGGRRFAFSVLVVVGDTKSKVGFAHSTAREVPEAVRKATEAAKRNMISVSLL   88 (199)
Q Consensus        17 ~~~~~l~ekvi~v~RV~k~tkgGr~~sf~alvvvGn~~G~vG~G~GKa~ev~~Ai~KA~~~Akknli~V~~~   88 (199)
                      ..+.+|+|+||+|+||+|||++||++||+|+|+|||+||++|||+|||.|+++||+||..+|++||++||+.
T Consensus         3 ~~~~~l~e~vi~i~rV~k~tk~Gr~~~f~a~VvvGn~~G~vG~G~gKa~ev~~Ai~KA~~~Ak~nl~~Vplv   74 (74)
T d1pkpa2           3 PNKLELEERVVAVNRVAKVVKGGRRLRFSALVVVGDKNGHVGFGTGKAQEVPEAIRKAIEDAKKNLIEVPIV   74 (74)
T ss_dssp             GGGSCCEEEEEEEECSSSBCSSCCSSCEEEEEEEECSSSEEEEEEEEESSHHHHHHHHHHHHTTSCEECCCB
T ss_pred             CCCCCCEEEEEEEEEEEEEECCCCEEEEEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHHCCEEEECC
T ss_conf             654872179999950657855996268999999647999099877870177999999999998688896219

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: dsRBD-like
superfamily: dsRNA-binding domain-like
family: Ribosomal S5 protein, N-terminal domain
domain: Ribosomal S5 protein, N-terminal domain
species: Bacillus stearothermophilus [TaxId: 1422]