HHSEARCH alignment of GI: 254780244 and SCOP domain: d2uube2

Alignment

Probab=99.90  E-value=1.3e-24  Score=167.62  Aligned_cols=69  Identities=43%  Similarity=0.707  Sum_probs=67.6

Q ss_pred             CCEEEEEEECCCCEECCCCEEEEEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHCEEEEECCC
Q ss_conf             602100002244401278738467999998089983899704744247899999999963012522016
Q gi|254780244|r   21 SIVDRIVAINRVSTALPGGRRFAFSVLVVVGDTKSKVGFAHSTAREVPEAVRKATEAAKRNMISVSLLD   89 (199)
Q Consensus        21 ~l~ekvi~v~RV~k~tkgGr~~sf~alvvvGn~~G~vG~G~GKa~ev~~Ai~KA~~~Akknli~V~~~~   89 (199)
                      ||+|+||+|+||+|||++||++||+|||+|||+||+||||+|||.|+++||+||..+|++||++||+.+
T Consensus         1 d~~e~vv~i~rV~k~tk~Gr~~~f~alvvvGn~~G~vG~G~gKa~ev~~Ai~KA~~~Ak~nm~~Vpl~n   69 (69)
T d2uube2           1 DFEEKMILIRRTARMQAGGRRFRFGALVVVGDRQGRVGLGFGKAPEVPLAVQKAGYYARRNMVEVPLQN   69 (69)
T ss_dssp             CCEEEEEEEEEEEEEETTEEEEEEEEEEEEECSSSEEEEEEEEESSHHHHHHHHHHHHHHSEEECCCBT
T ss_pred             CCEEEEEEEEEEEEEECCCCEEEEEEEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHCCEEEECCC
T ss_conf             951279999725578759962579999999789984920233220889999999999986928975589

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: dsRBD-like
superfamily: dsRNA-binding domain-like
family: Ribosomal S5 protein, N-terminal domain
domain: Ribosomal S5 protein, N-terminal domain
species: Thermus thermophilus [TaxId: 274]