PSIBLAST alignment of GI: 254780244 and protein with PDB id: 1pkp
>gi|157833512|pdb|1PKP|A Chain A, The Structure Of Ribosomal Protein S5 Reveals Sites Of Interaction With 16s Rrna Length = 150
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 71/148 (47%), Positives = 101/148 (68%), Gaps = 1/148 (0%)
Query: 13 QNREERDNSIVDRIVAINRVSTALPGGRRFAFSVLVVVGDTKSKVGFAHSTAREVPEAVR 72
+ + +R+VA+NRV+ + GGRR FS LVVVGD VGF A+EVPEA+R
Sbjct: 2 RRINPNKLELEERVVAVNRVAKVVKGGRRLRFSALVVVGDKNGHVGFGTGKAQEVPEAIR 61
Query: 73 KATEAAKRNMISVSLLDGRTLHHDGVGRHGAGKVIMRSAMAGTGVIAGGAIRAVCEVLGM 132
KA E AK+N+I V ++ G T+ H+ +G GAG++I++ A GTGVIAGG RAV E+ G+
Sbjct: 62 KAIEDAKKNLIEVPIV-GTTIPHEVIGHFGAGEIILKPASEGTGVIAGGPARAVLELAGI 120
Query: 133 HDVVAKSIGSSNPHNVIRATFEVLRSQS 160
D+++KSIGS+ P N++RATF+ L+
Sbjct: 121 SDILSKSIGSNTPINMVRATFDGLKQLK 148