PSIBLAST alignment of GI: 254780244 and protein with PDB id: 1pns
>gi|34811533|pdb|1PNS|E Chain E, Crystal Structure Of A Streptomycin Dependent Ribosome From E. Coli, 30s Subunit Of 70s Ribosome. This File, 1pns, Contains The 30s Subunit, Two Trnas, And One Mrna Molecule. The 50s Ribosomal Subunit Is In File 1pnu. Length = 150
>gi|34811589|pdb|1PNX|E Chain E, Crystal Structure Of The Wild Type Ribosome From E. Coli, 30s Subunit Of 70s Ribosome. This File, 1pnx, Contains Only Molecules Of The 30s Ribosomal Subunit. The 50s Subunit Is In The Pdb File 1pny. Length = 150
Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats.
Identities = 62/149 (41%), Positives = 86/149 (57%), Gaps = 1/149 (0%)
Query: 21 SIVDRIVAINRVSTALPGGRRFAFSVLVVVGDTKSKVGFAHSTAREVPEAVRKATEAAKR 80
++++ I R + GGRRF F LVVVGD + +VG A EVP AV+KA A+R
Sbjct: 1 DFEEKMILIRRTARMQAGGRRFRFGALVVVGDRQGRVGLGFGKAPEVPLAVQKAGYYARR 60
Query: 81 NMISVSLLDGRTLHHDGVGRHGAGKVIMRSAMAGTGVIAGGAIRAVCEVLGMHDVVAKSI 140
NM+ V L + T+ H+ GA K++++ A GTGVIAG RA+ E+ G+ D++ K +
Sbjct: 61 NMVEVPLQN-GTIPHEIEVEFGASKIVLKPAAPGTGVIAGAVPRAILELAGVTDILTKEL 119
Query: 141 GSSNPHNVIRATFEVLRSQSHPRDVANRR 169
GS NP N+ AT E LR DV R
Sbjct: 120 GSRNPINIAYATMEALRQLRTKADVERLR 148