RPSBLAST alignment of GI: 254780244 and protein with PDBid: 2vqe

>2vqe_E 30S ribosomal protein S5; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: i.1.1.3 PDB: 1fka_E 1gix_H* 1hnw_E* 1hnx_E* 1hnz_E* 1hr0_E 1ibk_E* 1ibl_E* 1ibm_E 1jgo_H* 1jgp_H* 1jgq_H* 1ml5_H* 1xmo_E* 1xmq_E* 1xnq_E* 1xnr_E* 1yl4_H 2b64_E* 2b9m_E* ... Length = 162

 Score =  136 bits (343), Expect = 4e-33
 Identities = 62/154 (40%), Positives = 87/154 (56%), Gaps = 1/154 (0%)

Query: 19  DNSIVDRIVAINRVSTALPGGRRFAFSVLVVVGDTKSKVGFAHSTAREVPEAVRKATEAA 78
           +    ++++ I R +    GGRRF F  LVVVGD + +VG     A EVP AV+KA   A
Sbjct: 3   ETDFEEKMILIRRTARMQAGGRRFRFGALVVVGDRQGRVGLGFGKAPEVPLAVQKAGYYA 62

Query: 79  KRNMISVSLLDGRTLHHDGVGRHGAGKVIMRSAMAGTGVIAGGAIRAVCEVLGMHDVVAK 138
           +RNM+ V L    T+ H+     GA K++++ A  GTGVIAG   RA+ E+ G+ D++ K
Sbjct: 63  RRNMVEVPL-QNGTIPHEIEVEFGASKIVLKPAAPGTGVIAGAVPRAILELAGVTDILTK 121

Query: 139 SIGSSNPHNVIRATFEVLRSQSHPRDVANRRGIK 172
            +GS NP N+  AT E LR      DV   R  +
Sbjct: 122 ELGSRNPINIAYATMEALRQLRTKADVERLRKGE 155