HHsearch alignment for GI: 254780245 and conserved domain: PRK05593

Probab=100.00  E-value=0  Score=297.25  Aligned_cols=115  Identities=49%  Similarity=0.736  Sum_probs=109.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEEECCCCEEEEEEEECCCHHCCCCCCCCCHHHHHHHHHH
Q ss_conf             98879999989987768750578788249999638709999996279759999850210000013468667899999999
Q gi|254780245|r    1 MATKKKVLARRISRIRRHLKSVSRGRLRLSVCRSSKHIYGQIIDDSIGHTLVSASSLNEPLRSSLKTGANIVAATAVGNL   80 (120)
Q Consensus         1 m~~k~~~~~kR~~R~R~k~k~~~~~~pRL~V~rSnkhiyAQiIdd~~~~tl~saST~~k~~~~~~~~~~ni~aA~~vG~~   80 (120)
T Consensus         1 ~~~K~~~r~rR~~RiR~ki~~t~-~rpRL~VfrSnkhiyaQiIDD~~~~tl~saST~~k~~~~----~~n~~~A~~vG~~   75 (115)
T PRK05593          1 KMDKKEARLRRAKRVRKKISGTA-ERPRLSVFRSNRHIYAQVIDDVKGKTLASASTLEKDLKA----GGNKEAAKKVGKL   75 (115)
T ss_pred             CCCHHHHHHHHHHHHHHHHHCCC-CCCEEEEEECCCEEEEEEEECCCCCEEEEEECCCHHHHC----CCCHHHHHHHHHH
T ss_conf             98678999999999999972789-986799996088279999986999799997414244416----8849999999999


Q ss_pred             HHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf             9999997799799983898631225999999999658789
Q gi|254780245|r   81 LVERAVKVGVKSVYFDRGKHLYCGRIAALADAVRKGGVSF  120 (120)
Q Consensus        81 ia~r~~~~gI~~v~FDR~g~~yHGrvka~ad~~R~~Gl~F  120 (120)
T Consensus        76 ia~~a~~~~I~~v~FDR~g~~YHGrvkalAd~aRe~Gl~F  115 (115)
T PRK05593         76 IAERAKAKGIKQVVFDRGGYKYHGRVKALADAAREAGLKF  115 (115)
T ss_pred             HHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf             9999998799889981899842239999999999848999