HHsearch alignment for GI: 254780245 and conserved domain: PRK09607
>PRK09607 rps11p 30S ribosomal protein S11P; Reviewed.
Probab=93.50 E-value=0.68 Score=26.18 Aligned_cols=89 Identities=19% Similarity=0.038 Sum_probs=57.3
Q ss_pred EEEEEEECCCEEEEEEECCCCEEEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE-EECCC-CC-CC--
Q ss_conf 499996387099999962797599998502100000134686678999999999999997799799-98389-86-31--
Q gi|254780245|r 28 RLSVCRSSKHIYGQIIDDSIGHTLVSASSLNEPLRSSLKTGANIVAATAVGNLLVERAVKVGVKSV-YFDRG-KH-LY-- 102 (120)
Q Consensus 28 RL~V~rSnkhiyAQiIdd~~~~tl~saST~~k~~~~~~~~~~ni~aA~~vG~~ia~r~~~~gI~~v-~FDR~-g~-~y-- 102 (120)
T Consensus 8 ivhI~asfNNTivtvTD~~G~~~~~~ssgg~~~k~~~k--K~Tp~AAq~aae~~~~~a~~~Gi~~v~V~vkG~G~~~~k~ 85 (129)
T PRK09607 8 IAHIYASFNNTIITITDLTGAETIAKVSGGMVVKADRD--EPSPYAAMQAAFRAAELAKDKGITGVHIKVRAPGGNGSKT 85 (129)
T ss_pred EEEEEECCCCEEEEEECCCCCEEEEEECCCCEECCCCC--CCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCC
T ss_conf 99999368985999985999969999477630048887--6898999999999999999769858999998378777678
Q ss_pred --HHHHHHHHHHHHHCCCC
Q ss_conf --22599999999965878
Q gi|254780245|r 103 --CGRIAALADAVRKGGVS 119 (120)
Q Consensus 103 --HGrvka~ad~~R~~Gl~ 119 (120)
T Consensus 86 pGpGr~~ai-r~l~~~Gl~ 103 (129)
T PRK09607 86 PGPGAQAAI-RALARAGLR 103 (129)
T ss_pred CCCCHHHHH-HHHHHCCCE
T ss_conf 884289999-999868978