HHsearch alignment for GI: 254780245 and conserved domain: PTZ00090

>PTZ00090 40S ribosomal protein S11; Provisional.
Probab=96.50  E-value=0.014  Score=36.12  Aligned_cols=91  Identities=18%  Similarity=0.258  Sum_probs=64.7

Q ss_pred             CCCCEEEEEEECCCEEEEEEECCCC-EEEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
Q ss_conf             7882499996387099999962797-599998502100000134686678999999999999997799799983898631
Q gi|254780245|r   24 RGRLRLSVCRSSKHIYGQIIDDSIG-HTLVSASSLNEPLRSSLKTGANIVAATAVGNLLVERAVKVGVKSVYFDRGKHLY  102 (120)
Q Consensus        24 ~~~pRL~V~rSnkhiyAQiIdd~~~-~tl~saST~~k~~~~~~~~~~ni~aA~~vG~~ia~r~~~~gI~~v~FDR~g~~y  102 (120)
T Consensus        97 td~F~~V~ttsKNNvhaqvvNkS~nyrTvfgsfAGnVG~~K~~q--q~~kcAyRIGeniAkKcrRLGif~vdv---kFRr  171 (214)
T PTZ00090         97 TDRFMLVLTTSKNNVHAQLVNRSKNYKTVFGSFAGNVGFTKKLQ--QSERCAYRIGENIAKKCKRLGIFAVDV---KFRR  171 (214)
T ss_pred             CCEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHCEEEEEH---HHHH
T ss_conf             76189999805774440110044440256531154210678876--300689999889999988728221104---6899


Q ss_pred             HHHHHHHHHHHHHCCCC
Q ss_conf             22599999999965878
Q gi|254780245|r  103 CGRIAALADAVRKGGVS  119 (120)
Q Consensus       103 HGrvka~ad~~R~~Gl~  119 (120)
T Consensus       172 imRve~vlqa~~a~~l~  188 (214)
T PTZ00090        172 IMRVETVLQAFYANGLQ  188 (214)
T ss_pred             HHHHHHHHHHHHHCCCC
T ss_conf             99999999999973762