HHsearch alignment of GI: 254780245 and MMDB domain: 2j01_S_
>2j01_S (S:) 50S ribosomal protein L18; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus}
Probab=100.00 E-value=7.3e-38 Score=244.89 Aligned_cols=112 Identities=51% Similarity=0.753 Sum_probs=106.0
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEEECCCCEEEEEEEECCCHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 88799999899877687505787882499996387099999962797599998502100000134686678999999999
Q gi|254780245|r 2 ATKKKVLARRISRIRRHLKSVSRGRLRLSVCRSSKHIYGQIIDDSIGHTLVSASSLNEPLRSSLKTGANIVAATAVGNLL 81 (120)
Q Consensus 2 ~~k~~~~~kR~~R~R~k~k~~~~~~pRL~V~rSnkhiyAQiIdd~~~~tl~saST~~k~~~~~~~~~~ni~aA~~vG~~i 81 (120)
|+|+..+.+|+.|+|+++.+. .+|||+||+||+|||||||||.+++||||+||+|++++ ++|++||+.||++|
T Consensus 1 ~~k~~~r~rr~~r~r~k~~~~--~~~RL~V~~Snk~i~aqvid~~~~~~lasasT~e~~~~-----~~n~~Aa~~vG~~l 73 (112)
T 2j01_S 1 MARLTAYERRKFRVRNRIKRT--GRLRLSVFRSLKHIYAQIIDDEKGVTLVSASSLALKLK-----GNKTEVARQVGRAL 73 (112)
T ss_dssp ----------CCCCCSCSCCC--SSCEEECCBCSSCBCEEEEETTTTEEEEEECSTTTCCC-----SCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHCCC--CCCEEEEEEECCEEEEEEEECCCCCEEEEECCCCCCCC-----CCCHHHHHHHHHHH
T ss_conf 985028999999999987379--98669999707817999998798838998613332224-----65199999999999
Q ss_pred HHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 999997799799983898631225999999999658789
Q gi|254780245|r 82 VERAVKVGVKSVYFDRGKHLYCGRIAALADAVRKGGVSF 120 (120)
Q Consensus 82 a~r~~~~gI~~v~FDR~g~~yHGrvka~ad~~R~~Gl~F 120 (120)
|++|+++||++|+||||||+|||||++|+|++||+||+|
T Consensus 74 a~r~~~~gi~~v~fDrg~~~y~grv~a~~~~~r~~Gl~f 112 (112)
T 2j01_S 74 AEKALALGIKQVAFDRGPYKYHGRVKALAEGAREGGLEF 112 (112)
T ss_dssp HHHHHHTSCCCCBCCCSTTCSSSSCCCCSSCTTCC----
T ss_pred HHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 999998699889980899721209999999999848889