HHsearch alignment of GI: 254780245 and MMDB domain: 2zkr_n_
>2zkr_n (n:) 60S ribosomal protein L5; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=99.44 E-value=3.1e-12 Score=93.02 Aligned_cols=96 Identities=21% Similarity=0.201 Sum_probs=87.6
Q ss_pred CCCCEEEEEEECCCEEEEEEE--CCCCEEEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHC-------------
Q ss_conf 788249999638709999996--27975999985021000001346866789999999999999977-------------
Q gi|254780245|r 24 RGRLRLSVCRSSKHIYGQIID--DSIGHTLVSASSLNEPLRSSLKTGANIVAATAVGNLLVERAVKV------------- 88 (120)
Q Consensus 24 ~~~pRL~V~rSnkhiyAQiId--d~~~~tl~saST~~k~~~~~~~~~~ni~aA~~vG~~ia~r~~~~------------- 88 (120)
..+|||+|.+||++|.+||+. ..++.|||+|.|.|..-.++....+|.+||+..|.++|.+++++
T Consensus 46 s~K~RlVVR~TN~~ii~Qiv~~~~~GD~v~~sA~S~eL~kyG~k~g~~N~~AAY~TGlL~arR~L~kl~ld~~y~g~~e~ 125 (297)
T 2zkr_n 46 TPKYRMIVRVTNRDIICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEV 125 (297)
T ss_dssp CCSEEEEEEEETTEEEEEEEECCSSSCEEEEEEEGGGGGGTCCCSCSSSHHHHHHHHHHHHHHHHCCCSCCCCCSSCCSS
T ss_pred CCCCEEEEEEECCCEEEEEEEECCCCCEEEEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCC
T ss_conf 98605999984793899999851789899998632138665988888732899998999999998750620220464024
Q ss_pred --------------CCCEEEECCCCCCCH--HHHHHHHHHHHHCCCC
Q ss_conf --------------997999838986312--2599999999965878
Q gi|254780245|r 89 --------------GVKSVYFDRGKHLYC--GRIAALADAVRKGGVS 119 (120)
Q Consensus 89 --------------gI~~v~FDR~g~~yH--Grvka~ad~~R~~Gl~ 119 (120)
|..++++|-|-.+.. +||.|..-|+-++||.
T Consensus 126 ~ge~~~ve~~~~~~~~~~aiLDiGL~rtt~G~RVFaalKGa~DgGl~ 172 (297)
T 2zkr_n 126 TGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLS 172 (297)
T ss_dssp SSCCCCCSSSCSSSCCCBEEEECTTSCCCTTCHHHHHHHHHHHTTCB
T ss_pred CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCC
T ss_conf 56402334334688861699723654576675345441002257866