HHsearch results for GI: 254780245 and protein with PDBid: 2zjr_L
>2zjr_L 50S ribosomal protein L18; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: c.55.4.1 PDB: 1sm1_M* 2zjp_L* 2zjq_L 1nkw_M 3cf5_L* 3dll_L* 1nwy_M* 1nwx_M* 1xbp_M* 1pnu_M 1pny_M 1vor_P 1vou_P 1vow_P 1voy_P 1vp0_P
Probab=100.00 E-value=4.8e-42 Score=268.81 Aligned_cols=112 Identities=54% Similarity=0.764 Sum_probs=98.5
Q ss_pred CCCHHHHHHHHHHHHHHHHCCC--CCCCCEEEEEEECCCEEEEEEECCCCEEEEEEEECCCHHCCCCCCCCCHHHHHHHH
Q ss_conf 9887999998998776875057--87882499996387099999962797599998502100000134686678999999
Q gi|254780245|r 1 MATKKKVLARRISRIRRHLKSV--SRGRLRLSVCRSSKHIYGQIIDDSIGHTLVSASSLNEPLRSSLKTGANIVAATAVG 78 (120)
Q Consensus 1 m~~k~~~~~kR~~R~R~k~k~~--~~~~pRL~V~rSnkhiyAQiIdd~~~~tl~saST~~k~~~~~~~~~~ni~aA~~vG 78 (120)
|++.+. .+|+.|+|++++.. ..++|||+|||||+|||||||||.+++||||+||.+++ .++|+++|..||
T Consensus 1 M~~~~~--~rr~~R~r~kir~~~~~~~rpRL~V~rSnkhiyAQiIDd~~~~tl~saSt~~~~------~~~~~~~a~~vG 72 (114)
T 2zjr_L 1 MATATT--IRRKLRTRRKVRTTTAASGRLRLSVYRSSKHIYAQIIDDSRGQTLAAASSAALK------SGNKTDTAAAVG 72 (114)
T ss_dssp ---------CHHHHHHHHHHSCSTTTCSEEECCCTTSSCCCCCEEETTTTEECCCCCSCSCC------TTCSSSSHHHHH
T ss_pred CCCCHH--HHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEEEECCCCCEEEEEECCCHH------CCCCHHHHHHHH
T ss_conf 985178--999999998875334668987799997388089999978999799996102010------289678999999
Q ss_pred HHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 999999997799799983898631225999999999658789
Q gi|254780245|r 79 NLLVERAVKVGVKSVYFDRGKHLYCGRIAALADAVRKGGVSF 120 (120)
Q Consensus 79 ~~ia~r~~~~gI~~v~FDR~g~~yHGrvka~ad~~R~~Gl~F 120 (120)
++||++++++||++|+||||||+||||||||||++||+||+|
T Consensus 73 ~~ia~~~~~~gI~~vvFDR~g~~YHGrvkalAd~aR~~Gl~F 114 (114)
T 2zjr_L 73 KALAAAAAEKGIKQVVFDRGSYKYHGRVKALADAAREGGLDF 114 (114)
T ss_dssp HHHHHHHHTTCCCCCEECCCSSCSCSHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 997636888698289986899841029999999999848989