HHsearch results for GI: 254780245 and protein with PDBid: 2zkq_k
>2zkq_k 40S ribosomal protein S14E; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} PDB: 3jyv_K*
Probab=95.79 E-value=0.065 Score=30.94 Aligned_cols=89 Identities=15% Similarity=0.184 Sum_probs=60.0
Q ss_pred EEEEEEECCCEEEEEEECCCCEEEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE-EECCC--CCCC--
Q ss_conf 499996387099999962797599998502100000134686678999999999999997799799-98389--8631--
Q gi|254780245|r 28 RLSVCRSSKHIYGQIIDDSIGHTLVSASSLNEPLRSSLKTGANIVAATAVGNLLVERAVKVGVKSV-YFDRG--KHLY-- 102 (120)
Q Consensus 28 RL~V~rSnkhiyAQiIdd~~~~tl~saST~~k~~~~~~~~~~ni~aA~~vG~~ia~r~~~~gI~~v-~FDR~--g~~y-- 102 (120)
-+.|+-|..|..+.|. |..|.++++.|+-...+++.... +.--||..+++.+++++++.||+.+ ++=|| +...
T Consensus 30 ivhI~as~NNTiitlT-D~~Gn~~~~~SsG~~gfk~~~rk-~t~~AA~~aa~~~~~k~~~~Gik~v~v~vrG~g~~~~kg 107 (151)
T 2zkq_k 30 VCHIFASFNDTFVHVT-DLSGKETICRVTGGMKVKADRDE-SSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKT 107 (151)
T ss_dssp CEEEEECSSCEEEEEE-CTTCCEEEEEESTTSSCCTTTTT-TSHHHHHHHHHHHHHHTTTTCCCBCCEEEESSCCBTTBC
T ss_pred EEEEEECCCCEEEEEE-CCCCCEEEEEECCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCC
T ss_conf 9999905788499997-49999999985440014546556-732699999999999999849639999998405775578
Q ss_pred --HHHHHHHHHHHHHCCCC
Q ss_conf --22599999999965878
Q gi|254780245|r 103 --CGRIAALADAVRKGGVS 119 (120)
Q Consensus 103 --HGrvka~ad~~R~~Gl~ 119 (120)
.||-.|+ -++...||+
T Consensus 108 pGpGr~~ai-r~l~~~glk 125 (151)
T 2zkq_k 108 PGPGAQSAL-RALARSGMK 125 (151)
T ss_dssp CCTTHHHHH-HHHHHHTCC
T ss_pred CCCCHHHHH-HHHHHCCCE
T ss_conf 987578899-889768938