HHsearch results for GI: 254780245 and protein with PDBid: 2zkr_n
>2zkr_n 60S ribosomal protein L5; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=99.46 E-value=1.5e-12 Score=93.99 Aligned_cols=95 Identities=21% Similarity=0.204 Sum_probs=86.6
Q ss_pred CCCEEEEEEECCCEEEEEEE--CCCCEEEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHC--------------
Q ss_conf 88249999638709999996--27975999985021000001346866789999999999999977--------------
Q gi|254780245|r 25 GRLRLSVCRSSKHIYGQIID--DSIGHTLVSASSLNEPLRSSLKTGANIVAATAVGNLLVERAVKV-------------- 88 (120)
Q Consensus 25 ~~pRL~V~rSnkhiyAQiId--d~~~~tl~saST~~k~~~~~~~~~~ni~aA~~vG~~ia~r~~~~-------------- 88 (120)
.+|||+|.+||++|.+||+. ..++.|||+|.|.|..-.++....+|.+||+..|.++|.+++++
T Consensus 47 pK~RlVVR~TNk~ii~Qiv~~~~~GD~vl~sA~S~eL~kyG~k~gl~N~~AAYlTGlL~arR~L~k~~ld~~y~g~~e~~ 126 (297)
T 2zkr_n 47 PKYRMIVRVTNRDIICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVT 126 (297)
T ss_dssp CSEEEEEEEETTEEEEEEEECCSSSCEEEEEEEGGGGGGTCCCSCSSSHHHHHHHHHHHHHHHHCCCSCCCCCSSCCSSS
T ss_pred CCCEEEEEEECCCEEEEEEEEECCCCEEEEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC
T ss_conf 86059999837957999988617898999986421376659889987448999999999999987505133325750135
Q ss_pred -------------CCCEEEECCCCCCCH--HHHHHHHHHHHHCCCC
Q ss_conf -------------997999838986312--2599999999965878
Q gi|254780245|r 89 -------------GVKSVYFDRGKHLYC--GRIAALADAVRKGGVS 119 (120)
Q Consensus 89 -------------gI~~v~FDR~g~~yH--Grvka~ad~~R~~Gl~ 119 (120)
|+.++++|-|-.+.. +||.|..-|+-++||.
T Consensus 127 g~~~~ve~~~~~~g~f~aiLDiGL~rtt~G~RVFaalKGavDgGl~ 172 (297)
T 2zkr_n 127 GDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLS 172 (297)
T ss_dssp SCCCCCSSSCSSSCCCBEEEECTTSCCCTTCHHHHHHHHHHHTTCB
T ss_pred CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCC
T ss_conf 6402334334678862699713644466686689875112357746